Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11239 and 11240 are separated by 378 nucleotides11240 and 11241 are separated by 195 nucleotides11241 and 11242 are separated by 261 nucleotides11242 and 11243 are separated by 398 nucleotides mRNA_2871: 11239 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 411,310 to 412,108 11239 mRNA_2872: 11240 - HMMPfam-Pyridine nucleotide-disulphide oxidoreductase-PF00070,PRINTS-FAD-dependent pyridine nucleotide reductase signature-PR00368,PRINTS-Pyridine nucleotide disulphide reductase class-I signature-PR00411,SUPERFAMILY--SSF51905, at 412,487 to 414,015 11240 mRNA_2873: 11241 - HMMPfam-Yeast cortical protein KAR9-PF08580,ProSiteProfiles-GAR domain profile.-PS51460,SUPERFAMILY--SSF143575, at 414,211 to 417,159 11241 mRNA_2874: 11242 - K00555 TRMT1, trm1 tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase, at 417,421 to 420,167 11242 mRNA_2875: 11243 - HMMPfam-NMT1/THI5 like-PF09084,SUPERFAMILY--SSF53850, at 420,566 to 422,079 11243
Group Condition mRNA_2871 mRNA_2872 mRNA_2873 mRNA_2874 mRNA_2875
11239 11240 11241 11242 11243
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.5 -0.0 -1.2 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.1 -0.0 -1.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.4 +0.3 -0.8 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.0 +0.2 -1.3 -0.0
growth on oleic acid YNB Glucose +0.1 -0.0 +0.2 -1.3 +0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.1 -0.0 -0.7 +0.1
growth on oleic acid YNB Oleic Acid +0.5 -0.2 +0.2 -1.1 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.1 +0.1 -0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 +0.1 +0.2 -0.1
auxotrophy YNB Glucose -0.2 +0.0 -0.1 +0.3 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.0 +0.0 +0.2 +0.2
auxotrophy Dropout Complete -0.2 -0.2 -0.1 +0.9 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.2 -0.0 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.1 +0.1 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.1 +0.1 +0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 -0.2 +1.0 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.4 +0.3 -0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.1 +0.1 +0.7 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.1 -0.1 +0.7 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.3 +0.3 +0.4 -0.1
growth on ypd YPD +0.1 +0.2 +0.1 +1.7 -0.0
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