Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11242 and 11243 are separated by 398 nucleotides
11243 and 11244 are separated by 300 nucleotides
11244 and 11245 are separated by 227 nucleotides
11245 and 11246 are separated by 127 nucleotides
mRNA_2874: 11242 - K00555 TRMT1, trm1 tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase, at 417,421 to 420,167
11242
mRNA_2875: 11243 - HMMPfam-NMT1/THI5 like-PF09084,SUPERFAMILY--SSF53850, at 420,566 to 422,079
11243
mRNA_2876: 11244 - K18715 NUP159 nucleoporin NUP159, at 422,380 to 429,450
11244
mRNA_2877: 11245 - Hypothetical Protein, at 429,678 to 431,024
11245
mRNA_2878: 11246 - BLAST proteophosphoglycan ppg4 [Moesziomyces aphidis DSM 70..., at 431,152 to 434,004
11246
Group
Condition
mRNA
_2874
mRNA
_2875
mRNA
_2876
mRNA
_2877
mRNA
_2878
11242
11243
11244
11245
11246
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.2
-0.5
-0.1
+0.2
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.2
-1.0
+0.1
+0.1
growth on oleic acid
YNB Glucose
-1.3
+0.1
+0.4
+0.1
-0.2
growth on oleic acid
YNB Oleic Acid
-1.1
-0.0
+0.5
-0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-1.2
-0.3
+0.5
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-1.3
-0.0
+1.0
+0.1
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.7
-0.2
-0.8
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
-0.2
-0.1
+0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+1.0
-0.2
-0.4
-0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.1
+0.5
-0.3
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.0
+0.6
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.1
+0.9
+0.1
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.8
-0.3
+1.7
-0.1
+0.3
growth on ricinoleic acid
YNB Glucose
-0.7
+0.1
+1.3
+0.4
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.1
+0.7
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.7
-0.1
+0.5
+0.0
-0.2
auxotrophy
Dropout Complete
+0.9
-0.2
+0.4
-0.1
+0.1
growth on ypd
YPD
+1.7
-0.0
-0.2
-0.2
-0.2
auxotrophy
YNB Glucose
+0.3
-0.0
+0.8
+0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
+0.1
+2.1
+0.4
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+0.2
+2.3
+0.3
-0.2
remove
mRNA_2874
plot
remove
mRNA_2875
plot
remove
mRNA_2876
remove
mRNA_2877
plot
remove
mRNA_2878
plot