Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11246 and 11247 are separated by 187 nucleotides11247 and 11248 are separated by 1059 nucleotides11248 and 11249 are separated by 947 nucleotides11249 and 11250 are separated by 736 nucleotides mRNA_2878: 11246 - BLAST proteophosphoglycan ppg4 [Moesziomyces aphidis DSM 70..., at 431,152 to 434,004 11246 mRNA_2879: 11247 - HMMPfam-Protein of unknown function (DUF3237)-PF11578, at 434,192 to 435,080 11247 mRNA_2880: 11248 - K10531 pvdA L-ornithine N5-oxygenase, at 436,140 to 438,445 11248 mRNA_2881: 11249 - KOG0254 Predicted transporter (major facilitator superfamily), at 439,393 to 442,330 11249 mRNA_2882: 11250 - Hypothetical Protein, at 443,067 to 444,033 11250
Group Condition mRNA_2878 mRNA_2879 mRNA_2880 mRNA_2881 mRNA_2882
11246 11247 11248 11249 11250
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.3 -0.1 -0.5 -0.6
growth on oleic acid YNB Oleic Acid -0.1 -0.3 -0.3 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.8 +0.1 -0.7 -0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.7 -0.2 -0.6 -0.5
growth on ypd YPD -0.2 -0.0 +0.0 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.4 -0.1 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.8 -0.0 -0.5 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +1.6 -0.2 -1.3 -0.2
auxotrophy YNB Glucose -0.1 -0.1 -0.2 -0.1 +0.3
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.3 -0.1 -0.3 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.2 -0.2 +0.0 -0.0
growth on oleic acid YNB Glucose -0.2 +0.6 -0.1 -0.2 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.4 +0.3 +0.2 +0.1
growth on ricinoleic acid YNB Glucose -0.3 +0.9 +0.0 +0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.2 +0.2 +0.1 +0.5
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.3 -0.1 +0.2 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.9 +0.2 +0.2 -0.4
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.4 +0.3 -0.0 +0.2
auxotrophy Dropout Complete +0.1 +0.5 -0.1 -0.1 +0.7
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.8 +0.2 -0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.2 +1.0 +0.2 +0.1 +0.4
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