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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11251 and 11252 are separated by 307 nucleotides
11252 and 11253 are separated by 148 nucleotides
11253 and 11254 are separated by 348 nucleotides
11254 and 11255 are separated by 230 nucleotides
mRNA_2883: 11251 - K16675 ZDHHC9_14_18 palmitoyltransferase ZDHHC9/14/18, at 445,200 to 447,494
11251
mRNA_2884: 11252 - K10838 XPC xeroderma pigmentosum group C-complementing protein, at 447,802 to 451,973
11252
mRNA_2885: 11253 - K20246 EGT1 L-histidine Nalpha-methyltransferase / hercynylcysteine S-oxide synthase, at 452,122 to 455,835
11253
mRNA_2886: 11254 - Hypothetical Protein, at 456,184 to 458,722
11254
mRNA_2887: 11255 - K07442 TRM61, GCD14 tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit, at 458,953 to 460,669
11255
Group
Condition
mRNA
_2883
mRNA
_2884
mRNA
_2885
mRNA
_2886
mRNA
_2887
11251
11252
11253
11254
11255
facs on lipid accumulation
Sorted No BODIPY Gate
+0.6
-1.6
+0.4
-0.3
N.D.
growth on oleic acid
YNB Oleic Acid
-0.0
-0.4
-0.0
-0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-1.2
+0.7
-0.0
N.D.
growth on ypd
YPD
-0.5
+0.4
+0.2
-0.2
N.D.
auxotrophy
Dropout Complete
-0.3
-0.1
+0.0
+0.2
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.4
+0.0
+0.1
N.D.
growth on ricinoleic acid
YNB Glucose
+0.1
-0.0
+0.1
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.1
-0.1
+0.3
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.0
+0.2
+0.1
N.D.
auxotrophy
YNB Glucose
+0.0
+0.1
+0.1
-0.1
N.D.
growth on oleic acid
YNB Glucose
+0.4
-0.2
+0.1
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
-0.3
-0.1
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
-0.0
+0.1
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.1
-0.1
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.1
+0.1
+0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.1
+0.1
+0.3
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.8
-0.4
+0.1
-0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.1
+0.3
+0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
-0.1
+0.1
+0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.1
+0.4
+0.2
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.9
+1.6
-0.0
N.D.
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