Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11255 and 11256 are separated by 451 nucleotides11256 and 11257 are separated by 363 nucleotides11257 and 11258 are separated by 271 nucleotides11258 and 11259 are separated by 700 nucleotides mRNA_2887: 11255 - K07442 TRM61, GCD14 tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit, at 458,953 to 460,669 11255 mRNA_2888: 11256 - KOG1012 Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain, at 461,121 to 465,686 11256 mRNA_2889: 11257 - K08184 SLC16A7 MFS transporter, MCP family, solute carrier family 16 (monocarboxylic acid transporters), member 7, at 466,050 to 468,099 11257 mRNA_2890: 11258 - HMMPfam-Protein of unknown function (DUF2823)-PF11034, at 468,371 to 468,835 11258 mRNA_2891: 11259 - Hypothetical Protein, at 469,536 to 470,476 11259
Group Condition mRNA_2887 mRNA_2888 mRNA_2889 mRNA_2890 mRNA_2891
11255 11256 11257 11258 11259
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 +0.0 N.D. -2.6
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 -0.3 N.D. -1.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 -0.3 N.D. -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 +0.4 N.D. -1.3
growth on ricinoleic acid YNB Glucose N.D. -0.1 -0.0 N.D. -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 +0.2 N.D. -0.7
growth on ypd YPD N.D. +0.0 -0.2 N.D. -0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 -0.1 N.D. -0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 -0.3 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 +0.4 N.D. -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 +0.3 N.D. -0.4
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 +0.2 N.D. -0.4
auxotrophy YNB Glucose 75mM Methionine N.D. -0.0 +0.0 N.D. +0.4
growth on oleic acid YNB Glucose N.D. -0.0 -0.1 N.D. +0.7
auxotrophy Dropout Complete N.D. +0.0 -0.2 N.D. +0.8
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 -0.3 N.D. +1.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.3 +0.5 N.D. +0.3
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 +0.3 N.D. +0.7
growth on oleic acid YNB Oleic Acid N.D. -0.0 +0.1 N.D. +1.1
auxotrophy YNB Glucose N.D. +0.1 -0.0 N.D. +1.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 -0.5 N.D. +1.9
remove
mRNA_2887
plot
remove
mRNA_2888
plot
remove
mRNA_2889
remove
mRNA_2890
plot
remove
mRNA_2891
plot