Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11258 and 11259 are separated by 700 nucleotides
11259 and 11260 are separated by 715 nucleotides
11260 and 11261 are separated by 364 nucleotides
11261 and 11262 are separated by 715 nucleotides
mRNA_2890: 11258 - HMMPfam-Protein of unknown function (DUF2823)-PF11034, at 468,371 to 468,835
11258
mRNA_2891: 11259 - Hypothetical Protein, at 469,536 to 470,476
11259
mRNA_2892: 11260 - HMMPfam-Protein of unknown function (DUF2823)-PF11034, at 471,192 to 473,300
11260
mRNA_2893: 11261 - HMMPfam-Protein of unknown function (DUF2823)-PF11034, at 473,665 to 474,267
11261
mRNA_2894: 11262 - SUPERFAMILY--SSF52047, at 474,983 to 476,277
11262
Group
Condition
mRNA
_2890
mRNA
_2891
mRNA
_2892
mRNA
_2893
mRNA
_2894
11258
11259
11260
11261
11262
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-2.6
-0.1
+0.1
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.3
-0.1
-1.8
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-1.4
+0.0
-0.5
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-1.3
-0.2
-0.5
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.7
-0.1
-0.2
-0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.6
-0.3
-0.2
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.4
-0.3
-0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.8
-0.3
+0.4
+0.1
growth on ypd
YPD
N.D.
-0.3
+0.1
-0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.4
-0.1
-0.1
+0.4
growth on ricinoleic acid
YNB Glucose
N.D.
-0.5
-0.3
+0.6
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.4
+0.0
+0.0
+0.3
growth on oleic acid
YNB Glucose
N.D.
+0.7
-0.3
-0.0
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
-0.2
+0.4
+0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.7
+0.0
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.4
-0.3
+0.2
+0.7
growth on oleic acid
YNB Oleic Acid
N.D.
+1.1
-0.1
+0.0
+0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+1.1
-0.1
+0.1
+0.2
auxotrophy
YNB Glucose
N.D.
+1.2
-0.1
-0.1
+0.5
auxotrophy
Dropout Complete
N.D.
+0.8
-0.2
+0.2
+0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+1.9
+0.2
+0.4
+0.3
remove
mRNA_2890
plot
remove
mRNA_2891
plot
remove
mRNA_2892
remove
mRNA_2893
plot
remove
mRNA_2894
plot