Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11265 and 11266 are separated by 106 nucleotides
11266 and 11267 are separated by 437 nucleotides
11267 and 11268 are separated by 1590 nucleotides
11268 and 11269 are separated by 671 nucleotides
mRNA_2897: 11265 - K12613 DCP2 mRNA-decapping enzyme subunit 2, at 479,604 to 482,899
11265
mRNA_2898: 11266 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 483,006 to 488,500
11266
mRNA_2899: 11267 - K15276 SLC35B2, PAPST1 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2, at 488,938 to 492,084
11267
mRNA_2900: 11268 - BLAST pyridoxamine-phosphate oxidase [Moniliophthora ro..., at 493,675 to 494,245
11268
mRNA_2901: 11269 - KOG1289 Amino acid transporters, at 494,917 to 497,480
11269
Group
Condition
mRNA
_2897
mRNA
_2898
mRNA
_2899
mRNA
_2900
mRNA
_2901
11265
11266
11267
11268
11269
ypd buoyancy
40 hrs No Buoyancy Separation
-1.3
+0.1
-0.4
N.D.
-0.4
auxotrophy
Dropout Complete
-1.0
-0.1
+0.1
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.7
-0.2
+0.1
N.D.
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-1.3
+0.2
+0.4
N.D.
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.6
-0.1
-0.1
N.D.
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.1
-0.3
N.D.
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
-0.1
+0.1
N.D.
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
-0.1
N.D.
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.0
-0.2
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.0
-0.2
N.D.
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
+0.0
+0.2
N.D.
+0.1
auxotrophy
YNB Glucose
-0.6
-0.1
+0.3
N.D.
+0.1
growth on oleic acid
YNB Glucose
+0.4
-0.2
+0.0
N.D.
-0.4
growth on oleic acid
YNB Oleic Acid
-0.3
-0.1
-0.1
N.D.
+0.4
growth on ricinoleic acid
YNB Glucose
-0.4
-0.0
+0.4
N.D.
+0.1
growth on ypd
YPD
+0.9
-0.2
-0.1
N.D.
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
+0.0
+0.3
N.D.
+0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.7
+0.1
-0.1
N.D.
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
+0.1
+0.4
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.7
+0.1
+0.1
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.8
+0.3
-0.1
N.D.
+0.5
remove
mRNA_2897
plot
remove
mRNA_2898
plot
remove
mRNA_2899
remove
mRNA_2900
plot
remove
mRNA_2901
plot