Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11267 and 11268 are separated by 1590 nucleotides11268 and 11269 are separated by 671 nucleotides11269 and 11270 are separated by 683 nucleotides11270 and 11271 are separated by 149 nucleotides mRNA_2899: 11267 - K15276 SLC35B2, PAPST1 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2, at 488,938 to 492,084 11267 mRNA_2900: 11268 - BLAST pyridoxamine-phosphate oxidase [Moniliophthora ro..., at 493,675 to 494,245 11268 mRNA_2901: 11269 - KOG1289 Amino acid transporters, at 494,917 to 497,480 11269 mRNA_2902: 11270 - K20367 ERGIC3, ERV46 endoplasmic reticulum-Golgi intermediate compartment protein 3, at 498,164 to 500,409 11270 mRNA_2903: 11271 - K06662 HRAD17, RAD24 cell cycle checkpoint protein, at 500,559 to 503,580 11271
Group Condition mRNA_2899 mRNA_2900 mRNA_2901 mRNA_2902 mRNA_2903
11267 11268 11269 11270 11271
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 N.D. -0.4 -0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. -0.0 +0.2 -0.6
auxotrophy Dropout Complete +0.1 N.D. -0.1 -0.0 -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. -0.5 +0.2 -0.0
growth on ypd YPD -0.1 N.D. +0.0 +0.2 -0.7
growth on oleic acid YNB Glucose +0.0 N.D. -0.4 +0.1 -0.3
auxotrophy YNB Glucose +0.3 N.D. +0.1 -0.0 -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. +0.1 -0.3 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. -0.3 +0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. -0.0 +0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.2 +0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 N.D. -0.3 +0.3 -0.1
growth on oleic acid YNB Oleic Acid -0.1 N.D. +0.4 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.1 +0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. +0.1 +0.6 -0.7
facs on lipid accumulation Sorted No BODIPY Gate +0.4 N.D. +0.1 +0.3 -0.5
growth on ricinoleic acid YNB Glucose +0.4 N.D. +0.1 +0.2 -0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.4 N.D. -0.2 +0.6 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. +0.5 -0.0 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. +0.2 +0.5 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. +0.7 +0.6 -0.1
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