Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11270 and 11271 are separated by 149 nucleotides
11271 and 11272 are separated by 166 nucleotides
11272 and 11273 are separated by 111 nucleotides
11273 and 11274 are separated by 1892 nucleotides
mRNA_2902: 11270 - K20367 ERGIC3, ERV46 endoplasmic reticulum-Golgi intermediate compartment protein 3, at 498,164 to 500,409
11270
mRNA_2903: 11271 - K06662 HRAD17, RAD24 cell cycle checkpoint protein, at 500,559 to 503,580
11271
mRNA_2904: 11272 - K03847 ALG12 alpha-1,6-mannosyltransferase, at 503,747 to 505,698
11272
mRNA_2905: 11273 - Hypothetical Protein, at 505,810 to 506,740
11273
mRNA_2906: 11274 - K02960 RP-S16e, RPS16 small subunit ribosomal protein S16e, at 508,633 to 509,349
11274
Group
Condition
mRNA
_2902
mRNA
_2903
mRNA
_2904
mRNA
_2905
mRNA
_2906
11270
11271
11272
11273
11274
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.3
-0.8
-1.4
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.3
-2.4
+0.3
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.6
-0.7
-1.8
+0.1
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-0.5
-1.4
-0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.0
-0.2
-1.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-0.0
-0.9
-0.1
N.D.
growth on oleic acid
YNB Oleic Acid
-0.1
-0.3
-0.5
+0.4
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.1
-0.1
-0.3
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.6
-0.3
-0.2
-0.4
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
+0.0
-1.1
+0.4
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.1
+0.0
-0.1
N.D.
growth on ypd
YPD
+0.2
-0.7
+0.2
+0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.0
+0.2
+0.0
N.D.
growth on oleic acid
YNB Glucose
+0.1
-0.3
+0.3
+0.5
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.3
+1.1
-0.4
N.D.
auxotrophy
Dropout Complete
-0.0
-0.6
+0.6
+1.0
N.D.
auxotrophy
YNB Glucose
-0.0
-0.8
+0.6
+1.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.6
+0.2
+1.4
N.D.
growth on ricinoleic acid
YNB Glucose
+0.2
-0.4
+0.7
+0.7
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.4
+0.2
+1.4
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.6
-0.1
+0.1
+0.9
N.D.
remove
mRNA_2902
plot
remove
mRNA_2903
plot
remove
mRNA_2904
remove
mRNA_2905
plot
remove
mRNA_2906
plot