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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11271 and 11272 are separated by 166 nucleotides
11272 and 11273 are separated by 111 nucleotides
11273 and 11274 are separated by 1892 nucleotides
11274 and 11275 are separated by 928 nucleotides
mRNA_2903: 11271 - K06662 HRAD17, RAD24 cell cycle checkpoint protein, at 500,559 to 503,580
11271
mRNA_2904: 11272 - K03847 ALG12 alpha-1,6-mannosyltransferase, at 503,747 to 505,698
11272
mRNA_2905: 11273 - Hypothetical Protein, at 505,810 to 506,740
11273
mRNA_2906: 11274 - K02960 RP-S16e, RPS16 small subunit ribosomal protein S16e, at 508,633 to 509,349
11274
mRNA_2907: 11275 - HMMPfam-FAD dependent oxidoreductase-PF01266,SUPERFAMILY--SSF51971, at 510,278 to 512,745
11275
Group
Condition
mRNA
_2903
mRNA
_2904
mRNA
_2905
mRNA
_2906
mRNA
_2907
11271
11272
11273
11274
11275
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
-1.8
+0.1
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-2.4
+0.3
N.D.
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
-1.4
-0.1
N.D.
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.8
-1.4
N.D.
+0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-1.1
+0.4
N.D.
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.2
-1.2
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.9
-0.1
N.D.
-0.1
growth on oleic acid
YNB Oleic Acid
-0.3
-0.5
+0.4
N.D.
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
-0.3
N.D.
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.2
-0.4
N.D.
+0.5
growth on ypd
YPD
-0.7
+0.2
+0.1
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.0
-0.1
N.D.
+0.3
growth on oleic acid
YNB Glucose
-0.3
+0.3
+0.5
N.D.
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.1
+0.9
N.D.
-0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.2
+0.0
N.D.
+0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.2
+1.4
N.D.
-0.6
growth on ricinoleic acid
YNB Glucose
-0.4
+0.7
+0.7
N.D.
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.6
+0.2
+1.4
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+1.1
-0.4
N.D.
+0.1
auxotrophy
YNB Glucose
-0.8
+0.6
+1.3
N.D.
+0.0
auxotrophy
Dropout Complete
-0.6
+0.6
+1.0
N.D.
+0.2
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