Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11274 and 11275 are separated by 928 nucleotides11275 and 11276 are separated by 104 nucleotides11276 and 11277 are separated by 421 nucleotides11277 and 11278 are separated by 220 nucleotides mRNA_2906: 11274 - K02960 RP-S16e, RPS16 small subunit ribosomal protein S16e, at 508,633 to 509,349 11274 mRNA_2907: 11275 - HMMPfam-FAD dependent oxidoreductase-PF01266,SUPERFAMILY--SSF51971, at 510,278 to 512,745 11275 mRNA_2908: 11276 - KOG3098 Uncharacterized conserved protein, at 512,850 to 515,031 11276 mRNA_2909: 11277 - Hypothetical Protein, at 515,453 to 516,872 11277 mRNA_2910: 11278 - K03657 uvrD, pcrA DNA helicase II / ATP-dependent DNA helicase PcrA, at 517,093 to 520,320 11278
Group Condition mRNA_2906 mRNA_2907 mRNA_2908 mRNA_2909 mRNA_2910
11274 11275 11276 11277 11278
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.5 -0.2 -0.5 +0.1
growth on oleic acid YNB Oleic Acid N.D. -0.3 -0.2 -0.5 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.5 -0.4 -0.3 +0.3
growth on ricinoleic acid YNB Glucose N.D. -0.4 -0.1 -0.5 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.3 -0.2 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.6 -0.2 +0.1 -0.0
growth on oleic acid YNB Glucose N.D. -0.3 -0.1 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 -0.0 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 -0.3 +0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine N.D. +0.0 -0.0 -0.3 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 -0.0 +0.1 -0.0
auxotrophy Dropout Complete N.D. +0.2 -0.1 -0.3 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.5 -0.1 -0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.0 +0.1 -0.2
auxotrophy YNB Glucose N.D. +0.0 -0.1 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.3 -0.1 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 +0.1 -0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.3 +0.0 +0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 +0.1 +0.1 -0.0
growth on ypd YPD N.D. +0.4 -0.1 +0.3 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.6 +0.3 +0.2 +0.2
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