Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11275 and 11276 are separated by 104 nucleotides11276 and 11277 are separated by 421 nucleotides11277 and 11278 are separated by 220 nucleotides11278 and 11279 are separated by 149 nucleotides mRNA_2907: 11275 - HMMPfam-FAD dependent oxidoreductase-PF01266,SUPERFAMILY--SSF51971, at 510,278 to 512,745 11275 mRNA_2908: 11276 - KOG3098 Uncharacterized conserved protein, at 512,850 to 515,031 11276 mRNA_2909: 11277 - Hypothetical Protein, at 515,453 to 516,872 11277 mRNA_2910: 11278 - K03657 uvrD, pcrA DNA helicase II / ATP-dependent DNA helicase PcrA, at 517,093 to 520,320 11278 mRNA_2911: 11279 - BLAST ATP-dependent DNA helicase [Trichosporon asahii v..., at 520,470 to 521,587 11279
Group Condition mRNA_2907 mRNA_2908 mRNA_2909 mRNA_2910 mRNA_2911
11275 11276 11277 11278 11279
growth on oleic acid YNB Oleic Acid -0.3 -0.2 -0.5 +0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.4 -0.3 +0.3 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.2 -0.5 +0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.6 -0.2 +0.1 -0.0 -0.3
growth on ricinoleic acid YNB Glucose -0.4 -0.1 -0.5 +0.2 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.2 -0.2 -0.1 -0.0
growth on oleic acid YNB Glucose -0.3 -0.1 -0.4 +0.2 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 +0.3 +0.2 +0.2 -1.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.0 -0.1 -0.1 +0.4
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.0 -0.3 +0.2 +0.2
auxotrophy Dropout Complete +0.2 -0.1 -0.3 +0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.0 +0.1 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 -0.0 +0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.0 +0.1 -0.0 +0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.1 -0.2 -0.2 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.1 +0.0 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.3 +0.2 -0.0 +0.8
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.0 +0.2 -0.1 +0.4
auxotrophy YNB Glucose +0.0 -0.1 +0.1 +0.2 +0.7
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 +0.1 -0.0 +0.5
growth on ypd YPD +0.4 -0.1 +0.3 +0.1 +0.5
remove
mRNA_2907
plot
remove
mRNA_2908
plot
remove
mRNA_2909
remove
mRNA_2910
plot
remove
mRNA_2911
plot