Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11276 and 11277 are separated by 421 nucleotides
11277 and 11278 are separated by 220 nucleotides
11278 and 11279 are separated by 149 nucleotides
11279 and 11280 are separated by 365 nucleotides
mRNA_2908: 11276 - KOG3098 Uncharacterized conserved protein, at 512,850 to 515,031
11276
mRNA_2909: 11277 - Hypothetical Protein, at 515,453 to 516,872
11277
mRNA_2910: 11278 - K03657 uvrD, pcrA DNA helicase II / ATP-dependent DNA helicase PcrA, at 517,093 to 520,320
11278
mRNA_2911: 11279 - BLAST ATP-dependent DNA helicase [Trichosporon asahii v..., at 520,470 to 521,587
11279
mRNA_2912: 11280 - HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321, at 521,953 to 523,755
11280
Group
Condition
mRNA
_2908
mRNA
_2909
mRNA
_2910
mRNA
_2911
mRNA
_2912
11276
11277
11278
11279
11280
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.2
-0.1
-0.0
-0.4
growth on oleic acid
YNB Oleic Acid
-0.2
-0.5
+0.1
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.1
-0.0
-0.3
-0.1
growth on oleic acid
YNB Glucose
-0.1
-0.4
+0.2
+0.2
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
+0.2
+0.2
-1.3
+0.4
auxotrophy
Dropout Complete
-0.1
-0.3
+0.1
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.1
-0.1
+0.4
-0.4
growth on ricinoleic acid
YNB Glucose
-0.1
-0.5
+0.2
+0.0
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.5
+0.1
+0.3
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.0
+0.1
+0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.1
-0.2
+0.2
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.2
-0.2
+0.5
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
-0.3
+0.3
-0.0
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
+0.2
-0.0
+0.8
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.3
+0.2
+0.2
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.0
+0.1
+0.3
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.1
-0.0
+0.5
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.1
-0.0
+0.5
+0.0
growth on ypd
YPD
-0.1
+0.3
+0.1
+0.5
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.2
-0.1
+0.4
+0.3
auxotrophy
YNB Glucose
-0.1
+0.1
+0.2
+0.7
+0.2
remove
mRNA_2908
plot
remove
mRNA_2909
plot
remove
mRNA_2910
remove
mRNA_2911
plot
remove
mRNA_2912
plot