Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11278 and 11279 are separated by 149 nucleotides
11279 and 11280 are separated by 365 nucleotides
11280 and 11281 are separated by 288 nucleotides
11281 and 11282 are separated by 4574 nucleotides
mRNA_2910: 11278 - K03657 uvrD, pcrA DNA helicase II / ATP-dependent DNA helicase PcrA, at 517,093 to 520,320
11278
mRNA_2911: 11279 - BLAST ATP-dependent DNA helicase [Trichosporon asahii v..., at 520,470 to 521,587
11279
mRNA_2912: 11280 - HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321, at 521,953 to 523,755
11280
mRNA_2913: 11281 - K13703 ABHD11 abhydrolase domain-containing protein 11, at 524,044 to 525,341
11281
mRNA_2914: 11282 - Hypothetical Protein, at 529,916 to 530,782
11282
Group
Condition
mRNA
_2910
mRNA
_2911
mRNA
_2912
mRNA
_2913
mRNA
_2914
11278
11279
11280
11281
11282
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.8
-0.4
-2.5
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.0
-0.4
-0.6
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-1.3
+0.4
-0.3
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.3
-0.1
-0.7
+0.2
growth on oleic acid
YNB Glucose
+0.2
+0.2
-0.1
-0.7
-0.2
growth on ricinoleic acid
YNB Glucose
+0.2
+0.0
+0.3
-0.9
+0.1
growth on oleic acid
YNB Oleic Acid
+0.1
-0.1
-0.1
+0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.2
+0.0
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.1
-0.2
-0.2
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.5
+0.3
-0.5
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.3
+0.3
-0.3
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.5
-0.0
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.4
+0.3
-0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
+0.5
+0.0
-0.3
+0.2
auxotrophy
Dropout Complete
+0.1
+0.2
-0.2
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.3
+0.1
-0.3
+0.3
auxotrophy
YNB Glucose
+0.2
+0.7
+0.2
-0.8
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
-0.0
+0.6
-0.5
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.2
+0.3
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.4
-0.4
+1.0
+0.2
growth on ypd
YPD
+0.1
+0.5
-0.0
+0.4
+0.1
remove
mRNA_2910
plot
remove
mRNA_2911
plot
remove
mRNA_2912
remove
mRNA_2913
plot
remove
mRNA_2914
plot