Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11278 and 11279 are separated by 149 nucleotides11279 and 11280 are separated by 365 nucleotides11280 and 11281 are separated by 288 nucleotides11281 and 11282 are separated by 4574 nucleotides mRNA_2910: 11278 - K03657 uvrD, pcrA DNA helicase II / ATP-dependent DNA helicase PcrA, at 517,093 to 520,320 11278 mRNA_2911: 11279 - BLAST ATP-dependent DNA helicase [Trichosporon asahii v..., at 520,470 to 521,587 11279 mRNA_2912: 11280 - HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321, at 521,953 to 523,755 11280 mRNA_2913: 11281 - K13703 ABHD11 abhydrolase domain-containing protein 11, at 524,044 to 525,341 11281 mRNA_2914: 11282 - Hypothetical Protein, at 529,916 to 530,782 11282
Group Condition mRNA_2910 mRNA_2911 mRNA_2912 mRNA_2913 mRNA_2914
11278 11279 11280 11281 11282
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.8 -0.4 -2.5 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.0 -0.4 -0.6 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -1.3 +0.4 -0.3 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.3 -0.1 -0.7 +0.2
growth on oleic acid YNB Glucose +0.2 +0.2 -0.1 -0.7 -0.2
growth on ricinoleic acid YNB Glucose +0.2 +0.0 +0.3 -0.9 +0.1
growth on oleic acid YNB Oleic Acid +0.1 -0.1 -0.1 +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.2 +0.0 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 -0.2 -0.2 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.5 +0.3 -0.5 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.3 +0.3 -0.3 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.5 -0.0 -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.4 +0.3 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.5 +0.0 -0.3 +0.2
auxotrophy Dropout Complete +0.1 +0.2 -0.2 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.3 +0.1 -0.3 +0.3
auxotrophy YNB Glucose +0.2 +0.7 +0.2 -0.8 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.0 +0.6 -0.5 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.2 +0.3 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.4 -0.4 +1.0 +0.2
growth on ypd YPD +0.1 +0.5 -0.0 +0.4 +0.1
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