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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11280 and 11281 are separated by 288 nucleotides
11281 and 11282 are separated by 4574 nucleotides
11282 and 11283 are separated by 2397 nucleotides
11283 and 11284 are separated by 8402 nucleotides
mRNA_2912: 11280 - HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321, at 521,953 to 523,755
11280
mRNA_2913: 11281 - K13703 ABHD11 abhydrolase domain-containing protein 11, at 524,044 to 525,341
11281
mRNA_2914: 11282 - Hypothetical Protein, at 529,916 to 530,782
11282
mRNA_2915: 11283 - Hypothetical Protein, at 533,180 to 533,383
11283
mRNA_2916: 11284 - Hypothetical Protein, at 541,786 to 542,097
11284
Group
Condition
mRNA
_2912
mRNA
_2913
mRNA
_2914
mRNA
_2915
mRNA
_2916
11280
11281
11282
11283
11284
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-2.5
+0.1
-0.6
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.7
+0.2
-0.3
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.6
-0.2
+0.5
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.2
+0.3
-0.4
N.D.
growth on oleic acid
YNB Glucose
-0.1
-0.7
-0.2
+0.6
N.D.
auxotrophy
YNB Glucose
+0.2
-0.8
+0.3
-0.1
N.D.
auxotrophy
Dropout Complete
-0.2
-0.1
+0.3
-0.3
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.3
+0.3
-0.3
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.1
-0.1
-0.3
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.3
+0.2
-0.0
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
-0.3
-0.4
+0.2
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.1
+0.0
+0.2
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.5
-0.1
+0.5
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
+1.0
+0.2
-0.5
N.D.
growth on ricinoleic acid
YNB Glucose
+0.3
-0.9
+0.1
+0.8
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.2
+0.1
-0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.1
-0.2
+0.7
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.3
-0.3
+1.1
N.D.
growth on oleic acid
YNB Oleic Acid
-0.1
+0.1
-0.1
+1.1
N.D.
growth on ypd
YPD
-0.0
+0.4
+0.1
+0.4
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
-0.5
+0.3
+1.4
N.D.
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