Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11285 and 11286 are separated by 6479 nucleotides
11286 and 11287 are separated by 734 nucleotides
11287 and 11288 are separated by 292 nucleotides
11288 and 11289 are separated by 408 nucleotides
mRNA_2917: 11285 - Hypothetical Protein, at 546,492 to 547,553
11285
mRNA_2918: 11286 - HMMPfam-Acetyltransferase (GNAT) domain-PF13523,SMART-Siderophore biosynthesis protein domain-SM01006,SUPERFAMILY--SSF55729, at 554,033 to 555,107
11286
mRNA_2919: 11287 - BLAST Protein FAM186A [Mus musculus] [Rhizoctonia solani], at 555,842 to 558,142
11287
mRNA_2920: 11288 - KOG2234 Predicted UDP-galactose transporter, at 558,435 to 560,436
11288
mRNA_2921: 11289 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 560,845 to 562,189
11289
Group
Condition
mRNA
_2917
mRNA
_2918
mRNA
_2919
mRNA
_2920
mRNA
_2921
11285
11286
11287
11288
11289
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.9
-0.0
-0.4
-0.8
auxotrophy
YNB Glucose 75mM Methionine
-0.6
-0.3
-0.5
-0.1
-0.1
auxotrophy
YNB Glucose
-0.3
-0.1
-0.5
-0.4
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.1
-0.8
+0.0
-0.1
auxotrophy
Dropout Complete
-0.2
+0.2
-0.8
-0.2
+0.1
growth on oleic acid
YNB Oleic Acid
-0.2
-0.2
-0.1
-0.2
-0.1
growth on oleic acid
YNB Glucose
-0.3
-0.1
-0.4
-0.1
+0.2
growth on ricinoleic acid
YNB Glucose
+0.0
-0.0
-0.1
+0.1
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
+0.5
+0.2
-0.3
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.3
-0.5
-0.2
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.2
+0.5
-0.9
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.3
-0.2
-0.0
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.3
-0.3
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.2
-0.1
+0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.5
+0.2
-0.1
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.2
-0.3
+0.4
-0.2
growth on ypd
YPD
+0.0
+0.6
-0.5
+0.0
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
+0.7
+0.1
-0.1
+0.4
ypd buoyancy
40 hrs High Buoyancy
+0.5
+0.0
+0.0
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.2
-0.1
+0.5
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+1.0
-0.5
+0.2
+0.2
remove
mRNA_2917
plot
remove
mRNA_2918
plot
remove
mRNA_2919
remove
mRNA_2920
plot
remove
mRNA_2921
plot