Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11287 and 11288 are separated by 292 nucleotides11288 and 11289 are separated by 408 nucleotides11289 and 11290 are separated by 2411 nucleotides11290 and 11291 are separated by 276 nucleotides mRNA_2919: 11287 - BLAST Protein FAM186A [Mus musculus] [Rhizoctonia solani], at 555,842 to 558,142 11287 mRNA_2920: 11288 - KOG2234 Predicted UDP-galactose transporter, at 558,435 to 560,436 11288 mRNA_2921: 11289 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 560,845 to 562,189 11289 mRNA_2922: 11290 - K10807 RRM1 ribonucleoside-diphosphate reductase subunit M1, at 564,601 to 568,377 11290 mRNA_2923: 11291 - Hypothetical Protein, at 568,654 to 569,537 11291
Group Condition mRNA_2919 mRNA_2920 mRNA_2921 mRNA_2922 mRNA_2923
11287 11288 11289 11290 11291
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.2 -0.4 N.D. -1.5
auxotrophy YNB Glucose -0.5 -0.4 -0.1 N.D. -0.4
growth on ricinoleic acid YNB Glucose -0.1 +0.1 -0.5 N.D. -0.8
growth on ypd YPD -0.5 +0.0 +0.2 N.D. -1.1
growth on oleic acid YNB Glucose -0.4 -0.1 +0.2 N.D. -0.9
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.0 -0.0 N.D. -0.8
auxotrophy YNB Glucose 75mM Arginine -0.8 +0.0 -0.1 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.4 -0.8 N.D. +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.9 +0.0 N.D. -0.4
auxotrophy Dropout Complete -0.8 -0.2 +0.1 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.3 -0.4 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.4 -0.2 N.D. -0.7
growth on oleic acid YNB Oleic Acid -0.1 -0.2 -0.1 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.1 -0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.2 -0.2 N.D. -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 +0.2 +0.2 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 -0.3 N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.1 +0.4 N.D. -0.4
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.2 +0.2 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.1 +0.3 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.5 -0.1 N.D. +0.1
remove
mRNA_2919
plot
remove
mRNA_2920
plot
remove
mRNA_2921
remove
mRNA_2922
plot
remove
mRNA_2923
plot