Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11289 and 11290 are separated by 2411 nucleotides11290 and 11291 are separated by 276 nucleotides11291 and 11292 are separated by 242 nucleotides11292 and 11293 are separated by 436 nucleotides mRNA_2921: 11289 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 560,845 to 562,189 11289 mRNA_2922: 11290 - K10807 RRM1 ribonucleoside-diphosphate reductase subunit M1, at 564,601 to 568,377 11290 mRNA_2923: 11291 - Hypothetical Protein, at 568,654 to 569,537 11291 mRNA_2924: 11292 - K11663 ZNHIT1, VPS71 zinc finger HIT domain-containing protein 1, at 569,780 to 570,412 11292 mRNA_2925: 11293 - K03030 PSMD14, RPN11, POH1 26S proteasome regulatory subunit N11, at 570,849 to 571,975 11293
Group Condition mRNA_2921 mRNA_2922 mRNA_2923 mRNA_2924 mRNA_2925
11289 11290 11291 11292 11293
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 N.D. -1.5 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.5 N.D. -0.8 N.D. N.D.
growth on ypd YPD +0.2 N.D. -1.1 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 N.D. -0.8 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. -0.7 N.D. N.D.
growth on oleic acid YNB Glucose +0.2 N.D. -0.9 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. -0.3 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.4 N.D. -0.1 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 N.D. +0.3 N.D. N.D.
auxotrophy YNB Glucose -0.1 N.D. -0.4 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.0 N.D. -0.4 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. -0.1 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.1 N.D. -0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.3 N.D. +0.2 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 N.D. -0.4 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. +0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. +0.2 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. +0.1 N.D. N.D.
auxotrophy Dropout Complete +0.1 N.D. +0.2 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.3 N.D. +0.2 N.D. N.D.
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