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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11298 and 11299 are separated by 313 nucleotides
11299 and 11300 are separated by 232 nucleotides
11300 and 11301 are separated by 159 nucleotides
11301 and 11302 are separated by 637 nucleotides
mRNA_2930: 11298 - Interpro Nbl1 / Borealin N terminal, at 578,176 to 578,978
11298
mRNA_2931: 11299 - K06676 BRRN1, BRN1, CAPH condensin complex subunit 2, at 579,292 to 582,332
11299
mRNA_2932: 11300 - Hypothetical Protein, at 582,565 to 583,032
11300
mRNA_2933: 11301 - Hypothetical Protein, at 583,192 to 584,593
11301
mRNA_2934: 11302 - Hypothetical Protein, at 585,231 to 585,949
11302
Group
Condition
mRNA
_2930
mRNA
_2931
mRNA
_2932
mRNA
_2933
mRNA
_2934
11298
11299
11300
11301
11302
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.3
+0.2
-1.5
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
-0.1
+0.1
-0.5
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
+0.1
-0.0
-0.4
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
-0.4
-0.0
+0.2
growth on oleic acid
YNB Glucose
N.D.
N.D.
-0.4
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
-0.3
-0.1
+0.6
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
-0.0
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.4
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
+0.0
-0.3
+0.4
growth on ypd
YPD
N.D.
N.D.
+0.0
+0.1
+0.2
auxotrophy
Dropout Complete
N.D.
N.D.
-0.4
+0.0
+0.7
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
+0.1
-0.0
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
-0.3
+0.3
+0.3
auxotrophy
YNB Glucose
N.D.
N.D.
-0.6
+0.2
+0.7
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
-0.1
+0.2
+0.4
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
+0.0
+0.3
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
-0.1
-0.2
+0.9
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
+0.3
-0.0
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
+0.1
-0.0
+0.9
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
+0.2
+0.4
+0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
+0.3
+0.2
+0.9
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