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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11299 and 11300 are separated by 232 nucleotides
11300 and 11301 are separated by 159 nucleotides
11301 and 11302 are separated by 637 nucleotides
11302 and 11303 are separated by 914 nucleotides
mRNA_2931: 11299 - K06676 BRRN1, BRN1, CAPH condensin complex subunit 2, at 579,292 to 582,332
11299
mRNA_2932: 11300 - Hypothetical Protein, at 582,565 to 583,032
11300
mRNA_2933: 11301 - Hypothetical Protein, at 583,192 to 584,593
11301
mRNA_2934: 11302 - Hypothetical Protein, at 585,231 to 585,949
11302
mRNA_2935: 11303 - Hypothetical Protein, at 586,864 to 587,457
11303
Group
Condition
mRNA
_2931
mRNA
_2932
mRNA
_2933
mRNA
_2934
mRNA
_2935
11299
11300
11301
11302
11303
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.3
+0.2
-1.5
-0.7
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
+0.1
-0.5
-0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.1
-0.0
-0.4
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.0
-0.1
+0.3
-0.5
growth on oleic acid
YNB Oleic Acid
N.D.
-0.4
-0.0
+0.2
-0.0
growth on oleic acid
YNB Glucose
N.D.
-0.4
+0.1
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.3
-0.1
+0.6
+0.0
auxotrophy
YNB Glucose
N.D.
-0.6
+0.2
+0.7
-0.2
growth on ypd
YPD
N.D.
+0.0
+0.1
+0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
-0.0
+0.3
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.3
+0.3
+0.3
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.1
-0.2
+0.9
-0.3
auxotrophy
Dropout Complete
N.D.
-0.4
+0.0
+0.7
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.4
-0.1
-0.1
+0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.1
+0.2
+0.4
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.0
-0.3
+0.4
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.3
-0.0
+0.5
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.0
+0.3
+0.3
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.2
+0.4
+0.6
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.3
+0.2
+0.9
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.1
-0.0
+0.9
+0.5
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