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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11303 and 11304 are separated by 1860 nucleotides
11304 and 11305 are separated by 985 nucleotides
11305 and 11306 are separated by 119 nucleotides
11306 and 11307 are separated by 551 nucleotides
mRNA_2935: 11303 - Hypothetical Protein, at 586,864 to 587,457
11303
mRNA_2936: 11304 - Hypothetical Protein, at 589,318 to 590,178
11304
mRNA_2937: 11305 - K14521 NAT10, KRE33 N-acetyltransferase 10, at 591,164 to 595,198
11305
mRNA_2938: 11306 - Hypothetical Protein, at 595,318 to 600,734
11306
mRNA_2939: 11307 - K17807 TAM41, MMP37 mitochondrial translocator assembly and maintenance protein 41, at 601,286 to 603,136
11307
Group
Condition
mRNA
_2935
mRNA
_2936
mRNA
_2937
mRNA
_2938
mRNA
_2939
11303
11304
11305
11306
11307
growth on ypd
YPD
-0.1
-0.5
N.D.
-0.1
N.D.
auxotrophy
YNB Glucose
-0.2
-0.3
N.D.
+0.1
N.D.
auxotrophy
Dropout Complete
+0.1
-0.3
N.D.
-0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.0
N.D.
-0.0
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
+0.2
N.D.
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.2
N.D.
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.1
N.D.
-0.2
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
+0.6
N.D.
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.1
N.D.
+0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.2
N.D.
-0.1
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.2
N.D.
+0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.1
N.D.
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.1
N.D.
-0.3
N.D.
growth on oleic acid
YNB Glucose
+0.1
+0.1
N.D.
-0.0
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.4
N.D.
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.3
N.D.
-0.1
N.D.
growth on oleic acid
YNB Oleic Acid
-0.0
+0.4
N.D.
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
+0.1
N.D.
-0.2
N.D.
growth on ricinoleic acid
YNB Glucose
+0.1
+0.8
N.D.
-0.1
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+1.0
N.D.
+0.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+1.1
N.D.
+0.1
N.D.
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