Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11310 and 11311 are separated by 201 nucleotides11311 and 11312 are separated by 1055 nucleotides11312 and 11313 are separated by 257 nucleotides11313 and 11314 are separated by 524 nucleotides mRNA_2942: 11310 - HMMPfam-VanZ like family-PF04892, at 608,424 to 609,485 11310 mRNA_2943: 11311 - KOG1902 Putative signal transduction protein involved in RNA splicing, at 609,687 to 613,545 11311 mRNA_2944: 11312 - BLAST Putative CigA protein [Rhizopus microsporus], at 614,601 to 617,050 11312 mRNA_2945: 11313 - K15175 CDC73 parafibromin, at 617,308 to 618,975 11313 mRNA_2946: 11314 - SUPERFAMILY--SSF56112, at 619,500 to 621,824 11314
Group Condition mRNA_2942 mRNA_2943 mRNA_2944 mRNA_2945 mRNA_2946
11310 11311 11312 11313 11314
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 -0.4 -0.3 N.D. +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.6 -0.4 N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.0 +0.1 -0.1 N.D. -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.1 +0.2 N.D. -0.2
growth on ypd YPD -0.1 +0.0 -0.3 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.0 +0.2 N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.1 +0.0 N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.1 +0.2 N.D. -0.3
growth on oleic acid YNB Glucose +0.4 +0.2 -0.0 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.0 -0.3 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.1 -0.1 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.2 +0.1 N.D. -0.2
auxotrophy YNB Glucose +0.3 +0.1 +0.3 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.1 +0.8 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.1 +0.4 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.3 +0.8 N.D. +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 +0.9 N.D. +0.2
growth on ricinoleic acid YNB Glucose +0.2 +0.2 +0.4 N.D. +0.0
auxotrophy Dropout Complete +0.1 -0.1 +0.8 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 +0.1 +0.8 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.1 +1.7 N.D. +0.2
remove
mRNA_2942
plot
remove
mRNA_2943
plot
remove
mRNA_2944
remove
mRNA_2945
plot
remove
mRNA_2946
plot