Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11312 and 11313 are separated by 257 nucleotides11313 and 11314 are separated by 524 nucleotides11314 and 11315 are separated by 869 nucleotides11315 and 11316 are separated by 278 nucleotides mRNA_2944: 11312 - BLAST Putative CigA protein [Rhizopus microsporus], at 614,601 to 617,050 11312 mRNA_2945: 11313 - K15175 CDC73 parafibromin, at 617,308 to 618,975 11313 mRNA_2946: 11314 - SUPERFAMILY--SSF56112, at 619,500 to 621,824 11314 mRNA_2947: 11315 - Hypothetical Protein, at 622,694 to 625,091 11315 mRNA_2948: 11316 - K12817 PRPF18, PRP18 pre-mRNA-splicing factor 18, at 625,370 to 627,125 11316
Group Condition mRNA_2944 mRNA_2945 mRNA_2946 mRNA_2947 mRNA_2948
11312 11313 11314 11315 11316
growth on oleic acid YNB Oleic Acid -0.1 N.D. -0.5 -0.2 N.D.
growth on ypd YPD -0.3 N.D. +0.0 -0.2 N.D.
growth on oleic acid YNB Glucose -0.0 N.D. -0.2 -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.3 N.D. +0.2 -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. -0.2 -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +0.2 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. -0.3 +0.0 N.D.
auxotrophy YNB Glucose +0.3 N.D. -0.2 +0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. +0.2 +0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 N.D. +0.1 +0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 N.D. +0.3 +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. -0.2 +0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.4 N.D. +0.1 -0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.4 N.D. +0.0 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. -0.0 +0.3 N.D.
auxotrophy Dropout Complete +0.8 N.D. +0.0 -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.8 N.D. -0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.8 N.D. -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.8 N.D. +0.0 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.9 N.D. +0.2 +0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +1.7 N.D. +0.2 +0.2 N.D.
remove
mRNA_2944
plot		 remove
mRNA_2945
plot		 remove
mRNA_2946		 remove
mRNA_2947
plot		 remove
mRNA_2948
plot