Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11313 and 11314 are separated by 524 nucleotides11314 and 11315 are separated by 869 nucleotides11315 and 11316 are separated by 278 nucleotides11316 and 11317 are separated by 617 nucleotides mRNA_2945: 11313 - K15175 CDC73 parafibromin, at 617,308 to 618,975 11313 mRNA_2946: 11314 - SUPERFAMILY--SSF56112, at 619,500 to 621,824 11314 mRNA_2947: 11315 - Hypothetical Protein, at 622,694 to 625,091 11315 mRNA_2948: 11316 - K12817 PRPF18, PRP18 pre-mRNA-splicing factor 18, at 625,370 to 627,125 11316 mRNA_2949: 11317 - K02267 COX6B cytochrome c oxidase subunit 6b, at 627,743 to 628,552 11317
Group Condition mRNA_2945 mRNA_2946 mRNA_2947 mRNA_2948 mRNA_2949
11313 11314 11315 11316 11317
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.2 +0.2 N.D. -2.1
growth on oleic acid YNB Oleic Acid N.D. -0.5 -0.2 N.D. -1.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 -0.1 N.D. -1.3
auxotrophy YNB Glucose 75mM Methionine N.D. -0.3 +0.0 N.D. -0.5
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 -0.1 N.D. -0.7
auxotrophy Dropout Complete N.D. +0.0 -0.2 N.D. -0.2
auxotrophy YNB Glucose N.D. -0.2 +0.0 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 +0.3 N.D. -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 +0.0 N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 -0.0 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 +0.1 N.D. -0.1
growth on oleic acid YNB Glucose N.D. -0.2 -0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.0 +0.3 N.D. -0.3
growth on ypd YPD N.D. +0.0 -0.2 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.1 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 -0.2 N.D. +0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 +0.0 N.D. +0.2
growth on ricinoleic acid YNB Glucose N.D. +0.0 +0.0 N.D. +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.0 +0.2 N.D. +0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.1 +0.4 N.D. +0.6
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.3 +0.2 N.D. +1.0
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