Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11316 and 11317 are separated by 617 nucleotides11317 and 11318 are separated by 4485 nucleotides11318 and 11319 are separated by 485 nucleotides11319 and 11320 are separated by 555 nucleotides mRNA_2948: 11316 - K12817 PRPF18, PRP18 pre-mRNA-splicing factor 18, at 625,370 to 627,125 11316 mRNA_2949: 11317 - K02267 COX6B cytochrome c oxidase subunit 6b, at 627,743 to 628,552 11317 mRNA_2950: 11318 - SUPERFAMILY--SSF56112, at 633,038 to 634,414 11318 mRNA_2951: 11319 - Hypothetical Protein, at 634,900 to 635,986 11319 mRNA_2952: 11320 - Hypothetical Protein, at 636,542 to 638,719 11320
Group Condition mRNA_2948 mRNA_2949 mRNA_2950 mRNA_2951 mRNA_2952
11316 11317 11318 11319 11320
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -1.3 -0.1 +0.3 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -2.1 +0.4 +0.4 -0.3
growth on oleic acid YNB Oleic Acid N.D. -1.0 -0.0 +0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.3 -0.4 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.5 -0.1 +0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.7 +0.3 -0.2 -0.1
auxotrophy YNB Glucose N.D. -0.1 -0.1 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.3 -0.3 +0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 -0.1 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.4 -0.2 +0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.6 -0.2 +0.2 -1.0
auxotrophy Dropout Complete N.D. -0.2 -0.0 +0.3 -0.5
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.3 +0.1 -0.3 -0.4
growth on ypd YPD N.D. +0.1 +0.1 -0.2 -0.3
growth on oleic acid YNB Glucose N.D. +0.2 +0.1 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 -0.1 +0.0 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.0 +0.1 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.3 -0.2 +0.3 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 +0.2 +0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +1.0 +0.2 -0.3 +0.0
growth on ricinoleic acid YNB Glucose N.D. +0.4 +0.3 +0.3 -0.0
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