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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11318 and 11319 are separated by 485 nucleotides
11319 and 11320 are separated by 555 nucleotides
11320 and 11321 are separated by 72 nucleotides
11321 and 11322 are separated by 1057 nucleotides
mRNA_2950: 11318 - SUPERFAMILY--SSF56112, at 633,038 to 634,414
11318
mRNA_2951: 11319 - Hypothetical Protein, at 634,900 to 635,986
11319
mRNA_2952: 11320 - Hypothetical Protein, at 636,542 to 638,719
11320
mRNA_2953: 11321 - Hypothetical Protein, at 638,792 to 639,757
11321
mRNA_2954: 11322 - HMMPfam-Glycosyl hydrolase catalytic core-PF11790, at 640,815 to 641,841
11322
Group
Condition
mRNA
_2950
mRNA
_2951
mRNA
_2952
mRNA
_2953
mRNA
_2954
11318
11319
11320
11321
11322
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
+0.2
-1.0
-0.4
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
-0.4
-0.5
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.3
-0.4
-0.4
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.0
-0.1
+0.1
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.3
+0.0
-0.0
+0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.2
-0.1
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.3
-0.1
+0.0
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.3
-0.5
+0.2
+0.1
auxotrophy
YNB Glucose
-0.1
-0.1
-0.4
+0.4
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.0
+0.2
+0.1
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.1
+0.1
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.2
-0.1
+0.2
+0.3
growth on oleic acid
YNB Oleic Acid
-0.0
+0.0
-0.1
+0.3
+0.2
growth on ypd
YPD
+0.1
-0.2
-0.3
+0.4
+0.4
growth on oleic acid
YNB Glucose
+0.1
-0.1
-0.3
+0.5
+0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.2
-0.4
+0.4
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
+0.4
-0.3
-0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.3
-0.3
+0.2
+0.3
growth on ricinoleic acid
YNB Glucose
+0.3
+0.3
-0.0
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.3
+0.2
+0.5
+0.1
auxotrophy
Dropout Complete
-0.0
+0.3
-0.5
+0.4
+0.6
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