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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11322 and 11323 are separated by 1007 nucleotides
11323 and 11324 are separated by 136 nucleotides
11324 and 11325 are separated by 454 nucleotides
11325 and 11326 are separated by 858 nucleotides
mRNA_2954: 11322 - HMMPfam-Glycosyl hydrolase catalytic core-PF11790, at 640,815 to 641,841
11322
mRNA_2955: 11323 - Hypothetical Protein, at 642,849 to 643,772
11323
mRNA_2956: 11324 - Hypothetical Protein, at 643,909 to 644,877
11324
mRNA_2957: 11325 - Hypothetical Protein, at 645,332 to 646,636
11325
mRNA_2958: 11326 - K17907 ATG9 autophagy-related protein 9, at 647,495 to 650,461
11326
Group
Condition
mRNA
_2954
mRNA
_2955
mRNA
_2956
mRNA
_2957
mRNA
_2958
11322
11323
11324
11325
11326
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.1
+0.2
-0.8
-1.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
+0.0
+0.1
-0.2
-1.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.2
-0.3
-0.6
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.3
-0.2
-0.5
+0.0
growth on ricinoleic acid
YNB Glucose
+0.1
-0.1
-0.1
-0.6
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.1
+0.2
+0.0
-0.8
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-0.1
+0.1
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.1
+0.1
+0.3
-0.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.1
+0.1
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.2
-0.1
+0.1
-0.1
growth on oleic acid
YNB Glucose
+0.4
+0.0
-0.1
-0.0
-0.1
growth on oleic acid
YNB Oleic Acid
+0.2
-0.1
-0.2
+0.3
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.2
+0.2
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.5
-0.1
-0.2
+0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.1
+0.1
+0.1
+0.2
auxotrophy
YNB Glucose
+0.4
-0.1
+0.0
+0.3
-0.0
growth on ypd
YPD
+0.4
+0.1
-0.2
+0.5
-0.1
auxotrophy
Dropout Complete
+0.6
+0.0
+0.1
+0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.1
+0.1
+0.4
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.1
+0.1
+0.5
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
+0.2
+0.1
+1.1
+0.2
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