Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11325 and 11326 are separated by 858 nucleotides11326 and 11327 are separated by 1087 nucleotides11327 and 11328 are separated by 411 nucleotides11328 and 11329 are separated by 990 nucleotides mRNA_2957: 11325 - Hypothetical Protein, at 645,332 to 646,636 11325 mRNA_2958: 11326 - K17907 ATG9 autophagy-related protein 9, at 647,495 to 650,461 11326 mRNA_2959: 11327 - KOG4554 Protein involved in inorganic phosphate transport, at 651,549 to 652,747 11327 mRNA_2960: 11328 - KOG2617 Citrate synthase, at 653,159 to 654,002 11328 mRNA_2961: 11329 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 654,993 to 657,914 11329
Group Condition mRNA_2957 mRNA_2958 mRNA_2959 mRNA_2960 mRNA_2961
11325 11326 11327 11328 11329
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -1.2 N.D. -0.5 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.8 -1.0 N.D. -0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 -0.0 N.D. -0.1 -1.0
auxotrophy Dropout Complete +0.2 -0.2 N.D. -0.8 -0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.8 N.D. +0.5 -1.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.1 N.D. -0.3 -0.7
growth on ricinoleic acid YNB Glucose -0.6 +0.1 N.D. -0.3 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.0 N.D. +0.5 -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.2 N.D. +0.2 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.8 N.D. +0.6 -0.8
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 N.D. -0.3 -0.3
growth on oleic acid YNB Glucose -0.0 -0.1 N.D. -0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.1 N.D. -0.1 -0.5
auxotrophy YNB Glucose +0.3 -0.0 N.D. -0.0 -0.5
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.2 N.D. -0.1 -0.4
growth on oleic acid YNB Oleic Acid +0.3 +0.2 N.D. -0.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.2 N.D. +1.0 -0.9
ypd buoyancy 40 hrs Median Buoyancy +0.5 +0.1 N.D. +0.4 -0.2
growth on ypd YPD +0.5 -0.1 N.D. +0.5 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.1 N.D. +0.8 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +1.1 +0.2 N.D. +1.5 +0.5
remove
mRNA_2957
plot
remove
mRNA_2958
plot
remove
mRNA_2959
remove
mRNA_2960
plot
remove
mRNA_2961
plot