Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11327 and 11328 are separated by 411 nucleotides11328 and 11329 are separated by 990 nucleotides11329 and 11330 are separated by 444 nucleotides11330 and 11331 are separated by 555 nucleotides mRNA_2959: 11327 - KOG4554 Protein involved in inorganic phosphate transport, at 651,549 to 652,747 11327 mRNA_2960: 11328 - KOG2617 Citrate synthase, at 653,159 to 654,002 11328 mRNA_2961: 11329 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 654,993 to 657,914 11329 mRNA_2962: 11330 - KOG3841 TEF-1 and related transcription factor, TEAD family, at 658,359 to 659,860 11330 mRNA_2963: 11331 - K01647 CS, gltA citrate synthase, at 660,416 to 662,957 11331
Group Condition mRNA_2959 mRNA_2960 mRNA_2961 mRNA_2962 mRNA_2963
11327 11328 11329 11330 11331
auxotrophy Dropout Complete N.D. -0.8 -0.7 -0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 -1.0 -0.4 N.D.
auxotrophy YNB Glucose N.D. -0.0 -0.5 -0.7 N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.3 -0.3 -0.6 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.3 -0.3 -0.5 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 -0.5 -0.5 N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.3 -0.4 -0.2 N.D.
growth on oleic acid YNB Glucose N.D. -0.2 -0.0 -0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.4 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.5 -1.1 +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.5 -0.4 +0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.3 -0.7 +0.6 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.5 -0.7 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 -0.6 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.6 -0.8 -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.3 -0.1 +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.4 -0.2 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +1.0 -0.9 -0.1 N.D.
growth on ypd YPD N.D. +0.5 +0.1 -0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.8 +0.0 +0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +1.5 +0.5 +0.1 N.D.
remove
mRNA_2959
plot
remove
mRNA_2960
plot
remove
mRNA_2961
remove
mRNA_2962
plot
remove
mRNA_2963
plot