Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11328 and 11329 are separated by 990 nucleotides11329 and 11330 are separated by 444 nucleotides11330 and 11331 are separated by 555 nucleotides11331 and 11332 are separated by 1189 nucleotides mRNA_2960: 11328 - KOG2617 Citrate synthase, at 653,159 to 654,002 11328 mRNA_2961: 11329 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 654,993 to 657,914 11329 mRNA_2962: 11330 - KOG3841 TEF-1 and related transcription factor, TEAD family, at 658,359 to 659,860 11330 mRNA_2963: 11331 - K01647 CS, gltA citrate synthase, at 660,416 to 662,957 11331 mRNA_2964: 11332 - K00965 galT, GALT UDPglucose--hexose-1-phosphate uridylyltransferase, at 664,147 to 666,205 11332
Group Condition mRNA_2960 mRNA_2961 mRNA_2962 mRNA_2963 mRNA_2964
11328 11329 11330 11331 11332
auxotrophy Dropout Complete -0.8 -0.7 -0.3 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -1.0 -0.4 N.D. +0.2
auxotrophy YNB Glucose -0.0 -0.5 -0.7 N.D. -0.1
growth on oleic acid YNB Oleic Acid -0.3 -0.3 -0.6 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.3 -0.5 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.5 -0.5 N.D. +0.1
growth on ricinoleic acid YNB Glucose -0.3 -0.4 -0.2 N.D. +0.1
growth on oleic acid YNB Glucose -0.2 -0.0 -0.4 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.4 -0.1 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.4 +0.4 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -1.1 +0.2 N.D. +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.7 -0.2 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 -0.8 -0.0 N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.2 -0.2 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.6 +0.2 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.0 -0.9 -0.1 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.1 +0.3 N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.7 +0.6 N.D. +0.5
growth on ypd YPD +0.5 +0.1 -0.0 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.8 +0.0 +0.2 N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +1.5 +0.5 +0.1 N.D. -0.3
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