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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11331 and 11332 are separated by 1189 nucleotides
11332 and 11333 are separated by 496 nucleotides
11333 and 11334 are separated by 392 nucleotides
11334 and 11335 are separated by 750 nucleotides
mRNA_2963: 11331 - K01647 CS, gltA citrate synthase, at 660,416 to 662,957
11331
mRNA_2964: 11332 - K00965 galT, GALT UDPglucose--hexose-1-phosphate uridylyltransferase, at 664,147 to 666,205
11332
mRNA_2965: 11333 - KOG1721 FOG Zn-finger, at 666,702 to 669,525
11333
mRNA_2966: 11334 - KOG3238 Chloride ion current inducer protein, at 669,918 to 671,056
11334
mRNA_2967: 11335 - Hypothetical Protein, at 671,807 to 673,227
11335
Group
Condition
mRNA
_2963
mRNA
_2964
mRNA
_2965
mRNA
_2966
mRNA
_2967
11331
11332
11333
11334
11335
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.2
-1.2
N.D.
-0.0
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
-1.1
N.D.
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.2
-0.9
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.1
-0.8
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.1
-0.6
N.D.
+0.0
growth on ypd
YPD
N.D.
-0.1
-0.7
N.D.
+0.2
growth on oleic acid
YNB Glucose
N.D.
-0.1
-0.7
N.D.
+0.3
auxotrophy
Dropout Complete
N.D.
+0.1
-1.3
N.D.
+0.7
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.0
-0.7
N.D.
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
-0.5
N.D.
+0.1
auxotrophy
YNB Glucose
N.D.
-0.1
-0.8
N.D.
+0.6
growth on oleic acid
YNB Oleic Acid
N.D.
-0.1
-0.2
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.0
-0.4
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
-0.8
N.D.
+0.6
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
-0.5
N.D.
+0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.2
-0.1
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.1
-0.9
N.D.
+0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.0
-0.1
N.D.
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.3
+0.7
N.D.
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.2
-0.1
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.5
-0.0
N.D.
+0.2
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