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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11332 and 11333 are separated by 496 nucleotides
11333 and 11334 are separated by 392 nucleotides
11334 and 11335 are separated by 750 nucleotides
11335 and 11336 are separated by 155 nucleotides
mRNA_2964: 11332 - K00965 galT, GALT UDPglucose--hexose-1-phosphate uridylyltransferase, at 664,147 to 666,205
11332
mRNA_2965: 11333 - KOG1721 FOG Zn-finger, at 666,702 to 669,525
11333
mRNA_2966: 11334 - KOG3238 Chloride ion current inducer protein, at 669,918 to 671,056
11334
mRNA_2967: 11335 - Hypothetical Protein, at 671,807 to 673,227
11335
mRNA_2968: 11336 - Hypothetical Protein, at 673,383 to 681,780
11336
Group
Condition
mRNA
_2964
mRNA
_2965
mRNA
_2966
mRNA
_2967
mRNA
_2968
11332
11333
11334
11335
11336
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-1.2
N.D.
-0.0
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-1.1
N.D.
+0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.9
N.D.
+0.0
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.8
N.D.
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.6
N.D.
+0.0
+0.1
growth on ypd
YPD
-0.1
-0.7
N.D.
+0.2
+0.0
growth on oleic acid
YNB Glucose
-0.1
-0.7
N.D.
+0.3
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.7
N.D.
+0.3
+0.1
auxotrophy
Dropout Complete
+0.1
-1.3
N.D.
+0.7
+0.2
growth on oleic acid
YNB Oleic Acid
-0.1
-0.2
N.D.
+0.1
+0.1
auxotrophy
YNB Glucose
-0.1
-0.8
N.D.
+0.6
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.4
N.D.
+0.2
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
N.D.
+0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.5
N.D.
+0.1
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
+0.7
N.D.
-0.4
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.8
N.D.
+0.6
+0.1
growth on ricinoleic acid
YNB Glucose
+0.1
-0.5
N.D.
+0.3
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-0.1
N.D.
+0.1
+0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.9
N.D.
+0.7
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.1
N.D.
+0.1
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.5
-0.0
N.D.
+0.2
+0.1
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