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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11337 and 11338 are separated by 305 nucleotides
11338 and 11339 are separated by 80 nucleotides
11339 and 11340 are separated by 269 nucleotides
11340 and 11341 are separated by 44 nucleotides
mRNA_2969: 11337 - Hypothetical Protein, at 682,054 to 682,344
11337
mRNA_2970: 11338 - K00219 fadH 2,4-dienoyl-CoA reductase (NADPH2), at 682,650 to 684,031
11338
mRNA_2971: 11339 - HMMPfam-Anp1-PF03452,SUPERFAMILY--SSF53448, at 684,112 to 685,866
11339
mRNA_2972: 11340 - K03850 ALG10 alpha-1,2-glucosyltransferase, at 686,136 to 688,131
11340
mRNA_2973: 11341 - K11996 MOCS3, UBA4 adenylyltransferase and sulfurtransferase, at 688,176 to 690,178
11341
Group
Condition
mRNA
_2969
mRNA
_2970
mRNA
_2971
mRNA
_2972
mRNA
_2973
11337
11338
11339
11340
11341
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.5
-0.3
-0.7
-0.7
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.2
+0.2
-0.1
-2.8
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.3
+0.1
+0.1
-1.2
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.1
+0.1
-0.1
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.1
-0.6
+0.2
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.1
+0.1
+0.1
-0.6
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.1
+0.1
-0.0
+0.2
growth on ypd
YPD
-0.0
-0.1
-0.0
+0.2
+0.2
auxotrophy
Dropout Complete
-0.0
-0.2
+0.3
-0.0
+0.4
auxotrophy
YNB Glucose
-0.1
-0.1
+0.2
+0.0
+0.5
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.2
+0.1
-0.1
+0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.2
-0.0
-0.0
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.0
+0.5
+0.2
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.2
+0.2
-0.1
+0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.1
+0.3
+0.1
-0.0
growth on ricinoleic acid
YNB Glucose
-0.4
+0.2
+0.6
+0.4
+0.1
growth on oleic acid
YNB Glucose
+0.2
+0.3
+0.2
+0.3
+0.8
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.2
+0.4
+0.3
+1.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.4
+1.3
+0.5
+0.1
growth on oleic acid
YNB Oleic Acid
+0.5
+0.3
+0.4
+0.4
+1.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
+0.3
+1.2
+0.3
+0.7
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