Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11340 and 11341 are separated by 44 nucleotides
11341 and 11342 are separated by 456 nucleotides
11342 and 11343 are separated by 723 nucleotides
11343 and 11344 are separated by 279 nucleotides
mRNA_2972: 11340 - K03850 ALG10 alpha-1,2-glucosyltransferase, at 686,136 to 688,131
11340
mRNA_2973: 11341 - K11996 MOCS3, UBA4 adenylyltransferase and sulfurtransferase, at 688,176 to 690,178
11341
mRNA_2974: 11342 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 690,635 to 692,698
11342
mRNA_2975: 11343 - KOG3072 Long chain fatty acid elongase, at 693,422 to 694,637
11343
mRNA_2976: 11344 - KOG2592 Tumor differentially expressed (TDE) protein, at 694,917 to 696,801
11344
Group
Condition
mRNA
_2972
mRNA
_2973
mRNA
_2974
mRNA
_2975
mRNA
_2976
11340
11341
11342
11343
11344
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-2.8
-0.1
+0.1
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
-0.7
+0.3
-0.4
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-1.2
-0.4
+0.2
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.5
-0.0
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.6
-0.2
+0.4
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.3
+0.2
-0.3
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.2
-0.0
+0.1
-0.3
growth on ricinoleic acid
YNB Glucose
+0.4
+0.1
-0.0
-0.4
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.0
+0.1
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.6
-0.2
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.0
+0.2
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.6
+0.2
+0.2
+0.3
auxotrophy
YNB Glucose
+0.0
+0.5
-0.2
+0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.7
+0.2
-0.1
-0.2
auxotrophy
Dropout Complete
-0.0
+0.4
+0.1
+0.1
-0.1
growth on ypd
YPD
+0.2
+0.2
-0.1
-0.1
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.5
+0.1
+0.1
-0.2
+0.5
growth on oleic acid
YNB Glucose
+0.3
+0.8
+0.0
+0.1
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.7
+0.3
-0.2
+0.4
growth on oleic acid
YNB Oleic Acid
+0.4
+1.0
+0.0
+0.2
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+1.4
+0.2
+0.2
-0.4
remove
mRNA_2972
plot
remove
mRNA_2973
plot
remove
mRNA_2974
remove
mRNA_2975
plot
remove
mRNA_2976
plot