Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11342 and 11343 are separated by 723 nucleotides11343 and 11344 are separated by 279 nucleotides11344 and 11345 are separated by 656 nucleotides11345 and 11346 are separated by 125 nucleotides mRNA_2974: 11342 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 690,635 to 692,698 11342 mRNA_2975: 11343 - KOG3072 Long chain fatty acid elongase, at 693,422 to 694,637 11343 mRNA_2976: 11344 - KOG2592 Tumor differentially expressed (TDE) protein, at 694,917 to 696,801 11344 mRNA_2977: 11345 - K05758 ARPC2 actin related protein 2/3 complex, subunit 2, at 697,458 to 698,969 11345 mRNA_2978: 11346 - HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407, at 699,095 to 700,907 11346
Group Condition mRNA_2974 mRNA_2975 mRNA_2976 mRNA_2977 mRNA_2978
11342 11343 11344 11345 11346
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.3 -0.2 N.D. -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 -0.3 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.2 -0.2 N.D. -0.3
growth on ricinoleic acid YNB Glucose -0.0 -0.4 +0.0 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.1 -0.1 N.D. -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -0.1 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.1 -0.3 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.4 -0.1 N.D. -0.1
auxotrophy YNB Glucose -0.2 +0.2 -0.1 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.1 -0.2 N.D. -0.3
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.1 -0.2 N.D. +0.0
growth on ypd YPD -0.1 -0.1 +0.3 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.2 +0.1 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.4 -0.3 N.D. +0.1
growth on oleic acid YNB Glucose +0.0 +0.1 +0.0 N.D. -0.1
auxotrophy Dropout Complete +0.1 +0.1 -0.1 N.D. +0.0
growth on oleic acid YNB Oleic Acid +0.0 +0.2 +0.2 N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.2 +0.5 N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.2 -0.4 N.D. +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.2 +0.4 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.2 +0.3 N.D. -0.2
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