Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11348 and 11349 are separated by 2046 nucleotides11349 and 11350 are separated by 2173 nucleotides11350 and 11351 are separated by 244 nucleotides11351 and 11352 are separated by 335 nucleotides mRNA_2980: 11348 - KOG3140 Predicted membrane protein, at 23 to 1,444 11348 mRNA_2981: 11349 - SUPERFAMILY--SSF50685, at 3,491 to 5,123 11349 mRNA_2982: 11350 - Hypothetical Protein, at 7,297 to 8,646 11350 mRNA_2983: 11351 - K00993 EPT1 ethanolaminephosphotransferase, at 8,891 to 11,294 11351 mRNA_2984: 11352 - HMMPfam-Cytochrome c oxidase subunit VIIc-PF02935,SUPERFAMILY--SSF81427, at 11,630 to 12,169 11352
Group Condition mRNA_2980 mRNA_2981 mRNA_2982 mRNA_2983 mRNA_2984
11348 11349 11350 11351 11352
growth on ricinoleic acid YNB Glucose -0.1 +0.0 -0.2 -0.1 -0.4
auxotrophy YNB Glucose +0.3 -0.0 -0.8 -0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 -0.0 -0.0 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.0 -0.4 +0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.0 -0.1 -0.0 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.3 -0.1 +0.2 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.2 -0.1 +0.1 +0.2
growth on oleic acid YNB Oleic Acid +0.4 +0.1 -0.3 -0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.4 -0.7 -0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 -0.5 +0.3 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.0 -0.1 +0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.6 +0.2 -0.6 -0.2 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.1 -0.3 +0.2 -0.1
auxotrophy Dropout Complete +0.4 +0.2 -0.6 -0.1 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 +0.4 -0.4 +0.2 -0.2
growth on ypd YPD +0.2 -0.1 +0.2 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.1 +0.5 +0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.0 +0.1 +0.3 +0.4
growth on oleic acid YNB Glucose +0.4 +0.3 -0.3 -0.0 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.0 +0.6 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.2 +0.3 +0.5 +0.3
remove
mRNA_2980
plot
remove
mRNA_2981
plot
remove
mRNA_2982
remove
mRNA_2983
plot
remove
mRNA_2984
plot