Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11352 and 11353 are separated by 484 nucleotides
11353 and 11354 are separated by 504 nucleotides
11354 and 11355 are separated by 100 nucleotides
11355 and 11356 are separated by 246 nucleotides
mRNA_2984: 11352 - HMMPfam-Cytochrome c oxidase subunit VIIc-PF02935,SUPERFAMILY--SSF81427, at 11,630 to 12,169
11352
mRNA_2985: 11353 - KOG1203 Predicted dehydrogenase, at 12,654 to 13,709
11353
mRNA_2986: 11354 - K19176 FAAH2 fatty acid amide hydrolase 2, at 14,214 to 16,255
11354
mRNA_2987: 11355 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 16,356 to 17,605
11355
mRNA_2988: 11356 - KOG1212 Amidases, at 17,852 to 19,907
11356
Group
Condition
mRNA
_2984
mRNA
_2985
mRNA
_2986
mRNA
_2987
mRNA
_2988
11352
11353
11354
11355
11356
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.7
-0.5
+0.0
-0.3
growth on ricinoleic acid
YNB Glucose
-0.4
-0.0
-0.2
-0.1
-0.1
auxotrophy
YNB Glucose
+0.1
-0.4
-0.4
-0.1
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.3
-0.5
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.4
-0.2
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.0
-0.0
+0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.1
-0.1
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-0.4
-0.3
+0.2
+0.0
growth on oleic acid
YNB Oleic Acid
-0.2
-0.1
+0.1
+0.1
-0.1
auxotrophy
Dropout Complete
+0.5
-0.6
-0.1
+0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.2
+0.0
+0.2
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
+0.1
+0.4
+0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.1
+0.1
+0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.2
+0.1
+0.2
-0.1
growth on oleic acid
YNB Glucose
+0.6
-0.4
+0.3
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.3
+0.1
+0.1
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.0
+0.4
+0.2
+0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.0
+0.5
+0.1
+0.6
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
+0.5
+0.3
+0.2
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.3
+0.4
+0.2
+0.6
growth on ypd
YPD
+0.3
+0.5
+0.5
+0.3
+0.2
remove
mRNA_2984
plot
remove
mRNA_2985
plot
remove
mRNA_2986
remove
mRNA_2987
plot
remove
mRNA_2988
plot