Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11352 and 11353 are separated by 484 nucleotides11353 and 11354 are separated by 504 nucleotides11354 and 11355 are separated by 100 nucleotides11355 and 11356 are separated by 246 nucleotides mRNA_2984: 11352 - HMMPfam-Cytochrome c oxidase subunit VIIc-PF02935,SUPERFAMILY--SSF81427, at 11,630 to 12,169 11352 mRNA_2985: 11353 - KOG1203 Predicted dehydrogenase, at 12,654 to 13,709 11353 mRNA_2986: 11354 - K19176 FAAH2 fatty acid amide hydrolase 2, at 14,214 to 16,255 11354 mRNA_2987: 11355 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 16,356 to 17,605 11355 mRNA_2988: 11356 - KOG1212 Amidases, at 17,852 to 19,907 11356
Group Condition mRNA_2984 mRNA_2985 mRNA_2986 mRNA_2987 mRNA_2988
11352 11353 11354 11355 11356
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.7 -0.5 +0.0 -0.3
growth on ricinoleic acid YNB Glucose -0.4 -0.0 -0.2 -0.1 -0.1
auxotrophy YNB Glucose +0.1 -0.4 -0.4 -0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.3 -0.5 +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.4 -0.2 -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.0 -0.0 +0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 -0.1 +0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.4 -0.3 +0.2 +0.0
growth on oleic acid YNB Oleic Acid -0.2 -0.1 +0.1 +0.1 -0.1
auxotrophy Dropout Complete +0.5 -0.6 -0.1 +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.2 +0.0 +0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.1 +0.4 +0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.1 +0.1 +0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.2 +0.1 +0.2 -0.1
growth on oleic acid YNB Glucose +0.6 -0.4 +0.3 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.3 +0.1 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.0 +0.4 +0.2 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.0 +0.5 +0.1 +0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.5 +0.3 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.3 +0.4 +0.2 +0.6
growth on ypd YPD +0.3 +0.5 +0.5 +0.3 +0.2
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