Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11359 and 11360 are separated by 593 nucleotides11360 and 11361 are separated by 1121 nucleotides11361 and 11362 are separated by 124 nucleotides11362 and 11363 are separated by 254 nucleotides mRNA_2991: 11359 - SUPERFAMILY--SSF50685, at 25,748 to 27,268 11359 mRNA_2992: 11360 - Hypothetical Protein, at 27,862 to 28,502 11360 mRNA_2993: 11361 - HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685, at 29,624 to 29,993 11361 mRNA_2994: 11362 - K14729 FOX2 multifunctional beta-oxidation protein, at 30,118 to 34,295 11362 mRNA_2995: 11363 - K20290 COG3, SEC34 conserved oligomeric Golgi complex subunit 3, at 34,550 to 37,704 11363
Group Condition mRNA_2991 mRNA_2992 mRNA_2993 mRNA_2994 mRNA_2995
11359 11360 11361 11362 11363
growth on ypd YPD -0.2 -0.4 -1.5 -0.1 +0.1
growth on oleic acid YNB Oleic Acid +0.3 -0.3 +0.0 -1.5 +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.1 -1.0 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 -0.5 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.0 -0.7 -0.0 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.6 -1.2 -0.0 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.1 -0.5 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.2 -0.2 +0.4 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.0 -0.7 +0.1 +0.9
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.3 +0.5 -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.4 +0.1 +0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.0 -0.5 +0.0 +0.8
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.5 -0.4 +0.3 +0.3
growth on ricinoleic acid YNB Glucose +0.1 -0.1 -0.2 +0.1 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.1 -0.6 -0.1 +1.1
growth on oleic acid YNB Glucose +0.2 +0.1 -0.2 +0.0 +0.4
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.2 -0.3 -0.0 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.6 -0.2 +0.1 +0.1
auxotrophy Dropout Complete +0.4 +0.0 -0.1 -0.2 +0.6
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.4 +0.4 +0.2 +0.1
auxotrophy YNB Glucose +0.2 -0.1 -0.0 +0.1 +0.9
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