Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11367 and 11368 are separated by 371 nucleotides11368 and 11369 are separated by 292 nucleotides11369 and 11370 are separated by 43 nucleotides11370 and 11371 are separated by 586 nucleotides mRNA_2999: 11367 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 43,195 to 45,486 11367 mRNA_3000: 11368 - K15528 FAAH fatty acid amide hydrolase, at 45,858 to 47,909 11368 mRNA_3001: 11369 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 48,202 to 49,332 11369 mRNA_3002: 11370 - HMMPfam-Fungal specific transcription factor domain-PF11951, at 49,376 to 50,038 11370 mRNA_3003: 11371 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 50,625 to 53,414 11371
Group Condition mRNA_2999 mRNA_3000 mRNA_3001 mRNA_3002 mRNA_3003
11367 11368 11369 11370 11371
growth on ypd YPD -0.2 -0.1 -0.4 -0.6 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 +0.1 +0.1 -0.7 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.3 -0.4 -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.1 -0.1 -0.3 +0.1
growth on oleic acid YNB Oleic Acid +0.0 -0.0 +0.2 -0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.0 +0.0 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 +0.1 -0.2 -0.2
growth on ricinoleic acid YNB Glucose +0.1 -0.1 +0.0 -0.1 +0.1
auxotrophy Dropout Complete +0.5 +0.0 +0.2 -0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.2 -0.1 +0.2 +0.1
growth on oleic acid YNB Glucose +0.1 +0.1 +0.1 +0.1 -0.1
auxotrophy YNB Glucose +0.5 -0.1 +0.2 -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 +0.1 +0.0 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.4 -0.1 +0.3 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.2 +0.2 +0.5 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.2 -0.3 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.2 +0.1 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.3 +0.2 +0.3 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 -0.2 +0.2 +0.4 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.4 +0.1 +0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.0 +0.3 +0.5 +0.1
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