Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11368 and 11369 are separated by 292 nucleotides11369 and 11370 are separated by 43 nucleotides11370 and 11371 are separated by 586 nucleotides11371 and 11372 are separated by 166 nucleotides mRNA_3000: 11368 - K15528 FAAH fatty acid amide hydrolase, at 45,858 to 47,909 11368 mRNA_3001: 11369 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 48,202 to 49,332 11369 mRNA_3002: 11370 - HMMPfam-Fungal specific transcription factor domain-PF11951, at 49,376 to 50,038 11370 mRNA_3003: 11371 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 50,625 to 53,414 11371 mRNA_3004: 11372 - K12624 LSM5 U6 snRNA-associated Sm-like protein LSm5, at 53,581 to 54,123 11372
Group Condition mRNA_3000 mRNA_3001 mRNA_3002 mRNA_3003 mRNA_3004
11368 11369 11370 11371 11372
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.1 -0.7 -0.7 N.D.
growth on ypd YPD -0.1 -0.4 -0.6 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.4 -0.1 +0.1 N.D.
auxotrophy Dropout Complete +0.0 +0.2 -0.3 -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.0 -0.1 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 -0.3 +0.1 N.D.
auxotrophy YNB Glucose -0.1 +0.2 -0.2 -0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.0 +0.2 -0.3 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 -0.2 -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.1 +0.2 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.3 -0.1 -0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.1 +0.0 -0.1 +0.1 N.D.
growth on oleic acid YNB Glucose +0.1 +0.1 +0.1 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 +0.0 +0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.2 +0.4 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.3 +0.2 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.1 +0.1 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.2 +0.5 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 +0.1 +0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.2 +0.3 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.3 +0.5 +0.1 N.D.
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