Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11370 and 11371 are separated by 586 nucleotides11371 and 11372 are separated by 166 nucleotides11372 and 11373 are separated by 630 nucleotides11373 and 11374 are separated by 658 nucleotides mRNA_3002: 11370 - HMMPfam-Fungal specific transcription factor domain-PF11951, at 49,376 to 50,038 11370 mRNA_3003: 11371 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 50,625 to 53,414 11371 mRNA_3004: 11372 - K12624 LSM5 U6 snRNA-associated Sm-like protein LSm5, at 53,581 to 54,123 11372 mRNA_3005: 11373 - K19708 PTC6, AUP1 protein phosphatase PTC6, at 54,754 to 56,074 11373 mRNA_3006: 11374 - K03259 EIF4E translation initiation factor 4E, at 56,733 to 57,511 11374
Group Condition mRNA_3002 mRNA_3003 mRNA_3004 mRNA_3005 mRNA_3006
11370 11371 11372 11373 11374
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.1 N.D. -2.2 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.7 N.D. -0.7 +0.6
growth on oleic acid YNB Oleic Acid -0.3 +0.1 N.D. -0.8 +0.0
growth on ypd YPD -0.6 -0.1 N.D. +0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2 N.D. +0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.1 N.D. -0.5 +0.2
growth on oleic acid YNB Glucose +0.1 -0.1 N.D. -0.5 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 N.D. -0.0 +0.1
auxotrophy Dropout Complete -0.3 -0.2 N.D. +0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.1 N.D. +0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.1 N.D. -0.3 -0.1
auxotrophy YNB Glucose -0.2 -0.1 N.D. +0.2 -0.0
growth on ricinoleic acid YNB Glucose -0.1 +0.1 N.D. -0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.5 +0.1 N.D. -0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.1 N.D. -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.3 N.D. -0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 N.D. +0.3 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 N.D. +0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.0 N.D. +0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.1 N.D. +0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.2 N.D. +0.2 +0.1
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