Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11375 and 11376 are separated by 250 nucleotides11376 and 11377 are separated by 186 nucleotides11377 and 11378 are separated by 381 nucleotides11378 and 11379 are separated by 2207 nucleotides mRNA_3007: 11375 - K15119 SLC25A39_40 solute carrier family 25, member 39/40, at 57,781 to 59,867 11375 mRNA_3008: 11376 - HMMPfam-Inositol hexakisphosphate-PF14566,SUPERFAMILY--SSF52799, at 60,118 to 65,560 11376 mRNA_3009: 11377 - Hypothetical Protein, at 65,747 to 66,498 11377 mRNA_3010: 11378 - K10398 KIF11, EG5 kinesin family member 11, at 66,880 to 69,062 11378 mRNA_3011: 11379 - K19177 NUS1 dehydrodolichyl diphosphate syntase complex subunit NUS1, at 71,270 to 72,413 11379
Group Condition mRNA_3007 mRNA_3008 mRNA_3009 mRNA_3010 mRNA_3011
11375 11376 11377 11378 11379
growth on ricinoleic acid YNB Glucose N.D. -0.2 -0.0 -0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.4 -0.0 -0.1 N.D.
auxotrophy YNB Glucose N.D. -0.4 +0.1 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.3 -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 -0.1 -0.1 N.D.
growth on oleic acid YNB Glucose N.D. +0.2 -0.3 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 -0.1 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 +0.2 -0.2 N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.1 -0.4 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.7 -0.1 +0.6 N.D.
growth on ypd YPD N.D. -0.1 -0.4 +0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 +0.2 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 -0.1 +0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 +0.1 -0.0 N.D.
auxotrophy Dropout Complete N.D. -0.1 +0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 -0.0 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 -0.0 +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.1 +0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 +0.1 +0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 +0.2 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.0 +0.0 +0.3 N.D.
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