Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11376 and 11377 are separated by 186 nucleotides11377 and 11378 are separated by 381 nucleotides11378 and 11379 are separated by 2207 nucleotides11379 and 11380 are separated by 429 nucleotides mRNA_3008: 11376 - HMMPfam-Inositol hexakisphosphate-PF14566,SUPERFAMILY--SSF52799, at 60,118 to 65,560 11376 mRNA_3009: 11377 - Hypothetical Protein, at 65,747 to 66,498 11377 mRNA_3010: 11378 - K10398 KIF11, EG5 kinesin family member 11, at 66,880 to 69,062 11378 mRNA_3011: 11379 - K19177 NUS1 dehydrodolichyl diphosphate syntase complex subunit NUS1, at 71,270 to 72,413 11379 mRNA_3012: 11380 - K06269 PPP1C serine/threonine-protein phosphatase PP1 catalytic subunit, at 72,843 to 74,660 11380
Group Condition mRNA_3008 mRNA_3009 mRNA_3010 mRNA_3011 mRNA_3012
11376 11377 11378 11379 11380
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.2 +0.2 N.D. -3.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.1 +0.6 N.D. -0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.2 -0.1 N.D. -0.6
growth on ypd YPD -0.1 -0.4 +0.4 N.D. -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.0 -0.1 N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.1 +0.1 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.0 +0.3 N.D. -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.1 +0.1 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 -0.1 N.D. +0.4
growth on ricinoleic acid YNB Glucose -0.2 -0.0 -0.3 N.D. +0.8
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.2 -0.2 N.D. +0.6
growth on oleic acid YNB Glucose +0.2 -0.3 -0.1 N.D. +0.7
auxotrophy YNB Glucose -0.4 +0.1 +0.0 N.D. +0.8
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.1 -0.0 N.D. +0.5
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.0 N.D. +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.0 +0.1 N.D. +0.5
auxotrophy Dropout Complete -0.1 +0.1 +0.1 N.D. +0.6
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 +0.3 N.D. +0.7
growth on oleic acid YNB Oleic Acid +0.1 -0.4 +0.1 N.D. +1.0
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.0 +0.3 N.D. +0.9
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.1 +0.2 N.D. +1.1
remove
mRNA_3008
plot
remove
mRNA_3009
plot
remove
mRNA_3010
remove
mRNA_3011
plot
remove
mRNA_3012
plot