Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11378 and 11379 are separated by 2207 nucleotides11379 and 11380 are separated by 429 nucleotides11380 and 11381 are separated by 331 nucleotides11381 and 11382 are separated by 532 nucleotides mRNA_3010: 11378 - K10398 KIF11, EG5 kinesin family member 11, at 66,880 to 69,062 11378 mRNA_3011: 11379 - K19177 NUS1 dehydrodolichyl diphosphate syntase complex subunit NUS1, at 71,270 to 72,413 11379 mRNA_3012: 11380 - K06269 PPP1C serine/threonine-protein phosphatase PP1 catalytic subunit, at 72,843 to 74,660 11380 mRNA_3013: 11381 - KOG1889 Putative phosphoinositide phosphatase, at 74,992 to 77,769 11381 mRNA_3014: 11382 - K14404 CPSF4, YTH1 cleavage and polyadenylation specificity factor subunit 4, at 78,302 to 78,988 11382
Group Condition mRNA_3010 mRNA_3011 mRNA_3012 mRNA_3013 mRNA_3014
11378 11379 11380 11381 11382
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. -3.4 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. -0.6 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. -0.5 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -0.0 N.D. N.D.
growth on ypd YPD +0.4 N.D. -0.4 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 N.D. -0.7 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.4 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. +0.3 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. +0.3 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. +0.6 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 N.D. +0.5 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.3 N.D. +0.8 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. +0.5 N.D. N.D.
growth on oleic acid YNB Glucose -0.1 N.D. +0.7 N.D. N.D.
auxotrophy Dropout Complete +0.1 N.D. +0.6 N.D. N.D.
auxotrophy YNB Glucose +0.0 N.D. +0.8 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.3 N.D. +0.7 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.1 N.D. +1.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. +0.9 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. +1.1 N.D. N.D.
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