Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11379 and 11380 are separated by 429 nucleotides11380 and 11381 are separated by 331 nucleotides11381 and 11382 are separated by 532 nucleotides11382 and 11383 are separated by 767 nucleotides mRNA_3011: 11379 - K19177 NUS1 dehydrodolichyl diphosphate syntase complex subunit NUS1, at 71,270 to 72,413 11379 mRNA_3012: 11380 - K06269 PPP1C serine/threonine-protein phosphatase PP1 catalytic subunit, at 72,843 to 74,660 11380 mRNA_3013: 11381 - KOG1889 Putative phosphoinositide phosphatase, at 74,992 to 77,769 11381 mRNA_3014: 11382 - K14404 CPSF4, YTH1 cleavage and polyadenylation specificity factor subunit 4, at 78,302 to 78,988 11382 mRNA_3015: 11383 - KOG3252 Uncharacterized conserved protein, at 79,756 to 80,863 11383
Group Condition mRNA_3011 mRNA_3012 mRNA_3013 mRNA_3014 mRNA_3015
11379 11380 11381 11382 11383
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -3.4 N.D. N.D. -0.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.7 N.D. N.D. -1.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.5 N.D. N.D. -1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.3 N.D. N.D. -1.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.5 N.D. N.D. -1.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.6 N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.4 N.D. N.D. -0.7
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.6 N.D. N.D. -0.4
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 N.D. N.D. +0.3
growth on oleic acid YNB Glucose N.D. +0.7 N.D. N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.5 N.D. N.D. -0.0
growth on oleic acid YNB Oleic Acid N.D. +1.0 N.D. N.D. -0.4
growth on ricinoleic acid YNB Glucose N.D. +0.8 N.D. N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.3 N.D. N.D. +0.9
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 N.D. N.D. +1.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +1.1 N.D. N.D. +0.3
auxotrophy YNB Glucose N.D. +0.8 N.D. N.D. +0.6
auxotrophy YNB Glucose 75mM Arginine N.D. +0.9 N.D. N.D. +0.8
auxotrophy YNB Glucose 75mM Methionine N.D. +0.7 N.D. N.D. +1.0
growth on ypd YPD N.D. -0.4 N.D. N.D. +2.3
auxotrophy Dropout Complete N.D. +0.6 N.D. N.D. +1.3
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