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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11380 and 11381 are separated by 331 nucleotides
11381 and 11382 are separated by 532 nucleotides
11382 and 11383 are separated by 767 nucleotides
11383 and 11384 are separated by 223 nucleotides
mRNA_3012: 11380 - K06269 PPP1C serine/threonine-protein phosphatase PP1 catalytic subunit, at 72,843 to 74,660
11380
mRNA_3013: 11381 - KOG1889 Putative phosphoinositide phosphatase, at 74,992 to 77,769
11381
mRNA_3014: 11382 - K14404 CPSF4, YTH1 cleavage and polyadenylation specificity factor subunit 4, at 78,302 to 78,988
11382
mRNA_3015: 11383 - KOG3252 Uncharacterized conserved protein, at 79,756 to 80,863
11383
mRNA_3016: 11384 - Hypothetical Protein, at 81,087 to 81,376
11384
Group
Condition
mRNA
_3012
mRNA
_3013
mRNA
_3014
mRNA
_3015
mRNA
_3016
11380
11381
11382
11383
11384
facs on lipid accumulation
Sorted Low BODIPY Gate
-3.4
N.D.
N.D.
-0.0
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
N.D.
N.D.
-1.5
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
N.D.
N.D.
-1.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
N.D.
N.D.
-1.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
N.D.
N.D.
-0.7
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.5
N.D.
N.D.
-1.0
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
N.D.
N.D.
+0.2
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.6
N.D.
N.D.
-0.4
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
N.D.
N.D.
-0.0
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
N.D.
N.D.
+0.3
+0.1
growth on oleic acid
YNB Glucose
+0.7
N.D.
N.D.
-0.3
+0.1
growth on oleic acid
YNB Oleic Acid
+1.0
N.D.
N.D.
-0.4
+0.1
growth on ricinoleic acid
YNB Glucose
+0.8
N.D.
N.D.
+0.1
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.3
N.D.
N.D.
+0.9
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
N.D.
N.D.
+1.2
+0.2
auxotrophy
YNB Glucose
+0.8
N.D.
N.D.
+0.6
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.1
N.D.
N.D.
+0.3
+0.0
growth on ypd
YPD
-0.4
N.D.
N.D.
+2.3
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.9
N.D.
N.D.
+0.8
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.7
N.D.
N.D.
+1.0
-0.1
auxotrophy
Dropout Complete
+0.6
N.D.
N.D.
+1.3
-0.2
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