Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11382 and 11383 are separated by 767 nucleotides11383 and 11384 are separated by 223 nucleotides11384 and 11385 are separated by 1382 nucleotides11385 and 11386 are separated by 12604 nucleotides mRNA_3014: 11382 - K14404 CPSF4, YTH1 cleavage and polyadenylation specificity factor subunit 4, at 78,302 to 78,988 11382 mRNA_3015: 11383 - KOG3252 Uncharacterized conserved protein, at 79,756 to 80,863 11383 mRNA_3016: 11384 - Hypothetical Protein, at 81,087 to 81,376 11384 mRNA_3017: 11385 - Hypothetical Protein, at 82,759 to 83,226 11385 mRNA_3018: 11386 - Hypothetical Protein, at 95,831 to 96,130 11386
Group Condition mRNA_3014 mRNA_3015 mRNA_3016 mRNA_3017 mRNA_3018
11382 11383 11384 11385 11386
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.5 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -1.1 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -1.0 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.7 -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -1.0 +0.3 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 -0.1 N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.4 +0.1 N.D. N.D.
growth on oleic acid YNB Glucose N.D. -0.3 +0.1 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.0 -0.2 N.D. N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.1 +0.1 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.0 +0.2 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.3 +0.0 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 +0.2 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.3 +0.1 N.D. N.D.
auxotrophy YNB Glucose N.D. +0.6 -0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.8 -0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.9 -0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +1.0 -0.1 N.D. N.D.
auxotrophy Dropout Complete N.D. +1.3 -0.2 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. +1.2 +0.2 N.D. N.D.
growth on ypd YPD N.D. +2.3 -0.2 N.D. N.D.
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