Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11389 and 11390 are separated by 355 nucleotides
11390 and 11391 are separated by 252 nucleotides
11391 and 11392 are separated by 155 nucleotides
11392 and 11393 are separated by 520 nucleotides
mRNA_3021: 11389 - K00697 otsA trehalose 6-phosphate synthase, at 115,343 to 117,642
11389
mRNA_3022: 11390 - K12394 AP1S1_2 AP-1 complex subunit sigma 1/2, at 117,998 to 118,989
11390
mRNA_3023: 11391 - K04709 LAG1 Acyl-CoA-dependent ceramide synthase, at 119,242 to 120,921
11391
mRNA_3024: 11392 - K20366 ERGIC2, ERV41 endoplasmic reticulum-Golgi intermediate compartment protein 2, at 121,077 to 122,686
11392
mRNA_3025: 11393 - K11354 cph1 two-component system, chemotaxis family, sensor kinase Cph1, at 123,207 to 127,605
11393
Group
Condition
mRNA
_3021
mRNA
_3022
mRNA
_3023
mRNA
_3024
mRNA
_3025
11389
11390
11391
11392
11393
growth on ricinoleic acid
YNB Glucose
-0.9
N.D.
N.D.
-0.3
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.9
N.D.
N.D.
-0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.6
N.D.
N.D.
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.9
N.D.
N.D.
+0.0
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
N.D.
N.D.
-0.2
+0.0
growth on ypd
YPD
-0.4
N.D.
N.D.
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
N.D.
N.D.
-0.1
-0.0
auxotrophy
YNB Glucose
-0.3
N.D.
N.D.
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
N.D.
N.D.
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
N.D.
N.D.
-0.2
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.4
N.D.
N.D.
+0.2
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
N.D.
N.D.
-0.1
+0.3
auxotrophy
Dropout Complete
-0.1
N.D.
N.D.
+0.0
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
N.D.
N.D.
+0.6
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
N.D.
N.D.
-0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.4
N.D.
N.D.
+0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.4
N.D.
N.D.
-0.0
-0.0
growth on oleic acid
YNB Glucose
+0.3
N.D.
N.D.
+0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
N.D.
N.D.
+0.2
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.9
N.D.
N.D.
-0.1
+0.2
growth on oleic acid
YNB Oleic Acid
+1.6
N.D.
N.D.
-0.0
+0.0
remove
mRNA_3021
plot
remove
mRNA_3022
plot
remove
mRNA_3023
remove
mRNA_3024
plot
remove
mRNA_3025
plot