Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11398 and 11399 are separated by 471 nucleotides11399 and 11400 are separated by 433 nucleotides11400 and 11401 are separated by 524 nucleotides11401 and 11402 are separated by 1720 nucleotides mRNA_3030: 11398 - Hypothetical Protein, at 137,392 to 137,958 11398 mRNA_3031: 11399 - KOG0527 HMG-box transcription factor, at 138,430 to 140,039 11399 mRNA_3032: 11400 - K09489 HSPA4 heat shock 70kDa protein 4, at 140,473 to 143,328 11400 mRNA_3033: 11401 - BLAST related to transcription factor medusa [Melanopsichiu..., at 143,853 to 146,672 11401 mRNA_3034: 11402 - K05767 IQGAP2_3 Ras GTPase-activating-like protein IQGAP2/3, at 148,393 to 151,658 11402
Group Condition mRNA_3030 mRNA_3031 mRNA_3032 mRNA_3033 mRNA_3034
11398 11399 11400 11401 11402
growth on ricinoleic acid YNB Ricinoleic Acid -1.1 +0.1 N.D. -1.9 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.5 N.D. -0.6 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.2 N.D. -1.7 +0.1
growth on ricinoleic acid YNB Glucose -0.5 -0.3 N.D. -1.3 +0.2
growth on ypd YPD -0.8 -0.5 N.D. +0.3 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -1.0 +0.0 N.D. -1.0 +0.8
auxotrophy Dropout Complete -0.8 -0.2 N.D. -0.6 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.1 N.D. -0.4 -0.5
auxotrophy YNB Glucose -0.3 -0.1 N.D. -0.9 +0.4
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.4 N.D. -0.6 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.1 N.D. -0.4 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.0 N.D. -1.1 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.6 +0.3 N.D. -0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 N.D. -0.7 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.1 N.D. -0.6 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.0 N.D. -0.2 -0.1
growth on oleic acid YNB Oleic Acid -0.0 -0.1 N.D. -0.5 +0.5
growth on oleic acid YNB Glucose +0.1 +0.1 N.D. -0.5 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.3 N.D. +0.4 +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.1 N.D. +0.1 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +1.6 +0.2 N.D. +0.1 +0.1
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