Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11400 and 11401 are separated by 524 nucleotides11401 and 11402 are separated by 1720 nucleotides11402 and 11403 are separated by 317 nucleotides11403 and 11404 are separated by 320 nucleotides mRNA_3032: 11400 - K09489 HSPA4 heat shock 70kDa protein 4, at 140,473 to 143,328 11400 mRNA_3033: 11401 - BLAST related to transcription factor medusa [Melanopsichiu..., at 143,853 to 146,672 11401 mRNA_3034: 11402 - K05767 IQGAP2_3 Ras GTPase-activating-like protein IQGAP2/3, at 148,393 to 151,658 11402 mRNA_3035: 11403 - K03661 ATPeV0B, ATP6F V-type H+-transporting ATPase 21kDa proteolipid subunit, at 151,976 to 152,968 11403 mRNA_3036: 11404 - Hypothetical Protein, at 153,289 to 156,377 11404
Group Condition mRNA_3032 mRNA_3033 mRNA_3034 mRNA_3035 mRNA_3036
11400 11401 11402 11403 11404
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -1.9 +0.2 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -1.7 +0.1 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.6 -0.6 N.D. -0.1
growth on ricinoleic acid YNB Glucose N.D. -1.3 +0.2 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.4 -0.5 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. -1.1 +0.3 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.4 -0.2 N.D. +0.0
auxotrophy YNB Glucose N.D. -0.9 +0.4 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.6 +0.2 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -1.0 +0.8 N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.3 -0.1 N.D. +0.0
growth on oleic acid YNB Glucose N.D. -0.5 +0.2 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.7 +0.3 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 -0.1 N.D. +0.1
growth on oleic acid YNB Oleic Acid N.D. -0.5 +0.5 N.D. -0.1
growth on ypd YPD N.D. +0.3 -0.4 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.6 +0.4 N.D. +0.1
auxotrophy Dropout Complete N.D. -0.6 +0.4 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.1 N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.1 +0.1 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.4 +0.4 N.D. -0.1
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